Construct: ORF ccsbBroadEn_04354

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017749.1_s300c1, BRDN0000393073
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NICN1 (84276)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84276 NICN1 nicolin 1 NM_032316.3 100% 100%
2 mouse 66257 Nicn1 nicolin 1 NM_025449.3 86.5% 89.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
705
ORF length:
639
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC CCGCGTTTTG GTGCCTTGCC ATGTGAAAGG CTCCGTAGCC CTCCAGGTGG
121GCGACGTGCG GACCTCCCAA GGCCGGCCTG GCGTGCTGGT CATCGATGTC ACCTTCCCCA
181GCGTCGCTCC CTTCGAGTTG CAGGAAATCA CGTTTAAGAA TTACTACACA GCTTTTTTGA
241GCATCCGTGT CCGTCAGTAC ACCTCAGCAC ACACACCTGC CAAGTGGGTG ACCTGCCTGC
301GGGACTACTG CCTAATGCCT GACCCACACA GTGAGGAGGG AGCCCAGGAG TATGTATCGC
361TGTTCAAGCA TCAGATGCTG TGTGACATGG CTAGAATATC GGAGCTACGC CTGATTCTGC
421GGCAGCCATC ACCACTGTGG CTGTCTTTCA CAGTGGAGGA GCTGCAGATC TATCAGCAGG
481GACCAAAGAG CCCCTCCGTG ACCTTTCCCA AGTGGCTCTC CCACCCAGTG CCCTGTGAGC
541AACCTGCACT CCTCCGTGAG GGTCTCCCAG ACCCCAGCAG GGTATCCTCC GAGGTGCAGC
601AGATGTGGGC ACTGACAGAG ATGATCCGGG CCAGTCACAC CTCCGCAAGG ATCGGCCGCT
661TTGATGTGGA TGGCTGTTAT GACCTGAACT TGCTCTCCTA CACTTGCCCA ACTTTCTTGT
721ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)