Construct: ORF ccsbBroadEn_04367

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017543.1_s300c1, BRDN0000396432
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NUDT22 (84304)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84304 NUDT22 nudix hydrolase 22 NM_001128612.2 100% 100%
2 human 84304 NUDT22 nudix hydrolase 22 NM_032344.4 99.7% 99.3% 779A>G;788T>C
3 human 84304 NUDT22 nudix hydrolase 22 NM_001128613.2 89.1% 89.1% 478_479ins99
4 human 84304 NUDT22 nudix hydrolase 22 NM_001271831.1 89.1% 89.1% 478_479ins99
5 human 84304 NUDT22 nudix hydrolase 22 XM_024448716.1 65.1% 64% (many diffs)
6 human 84304 NUDT22 nudix hydrolase 22 XM_024448715.1 63.6% 62.5% (many diffs)
7 human 84304 NUDT22 nudix hydrolase 22 XM_024448714.1 57.8% 56.8% (many diffs)
8 mouse 68323 Nudt22 nudix (nucleoside diphospha... NM_026675.2 83.3% 79.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
975
ORF length:
909
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA TCCTGAGGTG ACCTTGCTGC TGCAGTGCCC TGGCGGGGGC CTGCCCCAGG
121AGCAGATACA GGCCGAGCTG AGCCCCGCCC ATGACCGTCG CCCACTGCCA GGTGGGGACG
181AGGCCATCAC TGCCATCTGG GAGACCCGGC TAAAGGCCCA ACCCTGGCTC TTCGACGCCC
241CCAAGTTCCG CCTGCACTCA GCCACCCTGG CGCCTATTGG CTCTCGGGGG CCACAGCTGC
301TCCTGCGCCT GGGCCTTACT TCCTACCGAG ACTTCCTGGG CACCAACTGG TCCAGCTCAG
361CTGCCTGGCT GCGACAGCAG GGTGCCACCG ACTGGGGTGA CACGCAGGCC TATCTGGCGG
421ACCCACTGGG GGTGGGCGCT GCACTAGCCA CAGCCGATGA CTTCCTTGTC TTCCTGCGCC
481GCTCCCGGCA GGTGGCTGAG GCCCCTGGGC TGGTGGACGT ACCTGGTGGG CACCCTGAGC
541CTCAGGCCCT GTGCCCTGGT GGCAGCCCCC AGCACCAGGA CCTCGCTGGG CAGCTGGTGG
601TACATGAACT CTTTTCCAGT GTCCTTCAGG AGATCTGTGA TGAGGTGAAC CTGCCGCTGC
661TCACCCTGAG CCAGCCCCTG CTGTTGGGCA TCGCCCGAAA TGAGACCAGT GCTGGCCGAG
721CCAGTGCCGA GTTCTATGTC CAGTGCAGCC TGACTTCTGA GCAGGTGAGG AAGCACTACC
781TGAGTGGGGG ACCCGAGGCC CACGAGTCTA CAGGAATCTT CTTTGTGGAG ACACAGAACG
841TGCGGAGATT GCCCGAGACG GAGATGTGGG CTGAACTCTG CCCCTCGGCC AAAGGCGCCA
901TCATCCTCTA CAACCGGGTT CAGGGAAGTC CCACTGGAGC GGCCCTAGGG TCCCCAGCCC
961TACTCCCGCC GCTCTGCCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
1021tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)