Construct: ORF ccsbBroadEn_04382

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015412.1_s300c1, BRDN0000388121
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DYDC2 (84332)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84332 DYDC2 DPY30 domain containing 2 NM_001270041.1 100% 100%
2 human 84332 DYDC2 DPY30 domain containing 2 NM_032372.6 100% 100%
3 human 84332 DYDC2 DPY30 domain containing 2 XM_011540267.2 100% 100%
4 human 84332 DYDC2 DPY30 domain containing 2 XM_011540268.1 100% 100%
5 human 84332 DYDC2 DPY30 domain containing 2 NM_001270042.1 92.6% 92.6% 1_42del
6 human 84332 DYDC2 DPY30 domain containing 2 XM_011540270.2 71.3% 70% (many diffs)
7 human 84332 DYDC2 DPY30 domain containing 2 NR_070309.1 25.8% 1_380del;912_2052del
8 human 84332 DYDC2 DPY30 domain containing 2 NR_070308.1 23.3% 1_598del;1130_2270del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
597
ORF length:
531
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA AACTAACTAC CTGAAGAGGT GCTTTGGAAA TTGCCTGGCC CAGGCACTGG
121CAGAGGTGGC GAAGGTTCGG CCCAGTGACC CAATAGAATA CCTGGCTCAC TGGCTTTATC
181ATTACAGGAA AACAGCAAAA GCAAAAGAAG AGAATAGGGA AAAGAAGATC CACCTGCAGG
241AGGAATATGA CAGTAGCCTC AAGGAAATGG AAATGACAGA AATGCTGAAA CAGGAAGAGT
301ATCAGATTCA ACAGAACTGT GAAAAGTGTC ACAAGGAACT GACTTCTGAA ACTGTTTCCA
361CGAAGAAGAC CATATTCATG CAGGAGGACA CAAACCCCCT TGAGAAGGAG GCCTTGAAGC
421AGGAATTCCT GCCAGGTACT TCCAGTCTGA TTCCAGGAAT GCCTCAACAG GTTCCTCCTT
481CAGAGTCTGC TGGCCAGATT GACCAGAACT TCAAAATGCC ACAAGAAATA AATTACAAGG
541AGGCTTTTCA GCATGAAGTT GCTCATGAAA TGCCTCCTGG CTCCAAATCT CCTTTTTACC
601CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
661aac

Download FASTA (ORF) (Full)