Construct: ORF ccsbBroadEn_04890

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009460.1_s300c1, BRDN0000397766
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GRPEL2 (134266)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 134266 GRPEL2 GrpE like 2, mitochondrial NM_152407.4 100% 100%
2 mouse 17714 Grpel2 GrpE-like 2, mitochondrial NM_021296.2 85% 84.8% (many diffs)
3 mouse 17714 Grpel2 GrpE-like 2, mitochondrial XR_385980.3 19% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
741
ORF length:
675
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGTACGGTCG CTGTGGGCGG GCCGGCTGCG GGTGCAGCGC CTACTGGCCT
121GGAGTGCCGC GTGGGAGAGC AAGGGATGGC CGCTTCCATT CAGCACTGCC ACCCAGAGAA
181CTGCTGGTGA GGACTGCCGT TCTGAGGACC CTCCTGATGA GCTTGGGCCC CCTCTTGCTG
241AACGAGCCTT AAGGGTAAAA GCTGTTAAAC TGGAGAAAGA AGTCCAAGAT TTAACAGTGA
301GATACCAGAG AGCTATAGCT GATTGTGAAA ACATAAGGAG GCGAACCCAG AGATGTGTGG
361AAGACGCCAA GATATTTGGA ATCCAGAGTT TCTGTAAGGA CTTGGTGGAG GTGGCTGACA
421TTTTGGAGAA GACTACAGAG TGCATTTCTG AAGAATCGGA GCCTGAGGAC CAAAAGCTCA
481CTCTGGAGAA GGTCTTCCGA GGGTTGTTGC TTTTAGAAGC AAAGCTGAAA AGTGTGTTTG
541CCAAGCATGG CCTGGAGAAA CTGACACCCA TTGGTGACAA ATATGACCCC CATGAGCATG
601AACTCATCTG TCATGTGCCA GCTGGTGTTG GGGTGCAGCC TGGCACCGTG GCATTAGTAA
661GACAAGATGG CTACAAACTT CATGGCCGCA CCATTAGGCT TGCCCGAGTG GAAGTGGCAG
721TGGAGTCTCA GAGAAGACTG TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
781attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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