Construct: ORF ccsbBroadEn_05146

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017775.1_s300c1, BRDN0000398175
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF800 (168850)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 168850 ZNF800 zinc finger protein 800 NM_176814.5 100% 100%
2 human 168850 ZNF800 zinc finger protein 800 XM_005250181.4 100% 100%
3 human 168850 ZNF800 zinc finger protein 800 XM_006715867.4 91.4% 91.4% 1993_2178del
4 human 168850 ZNF800 zinc finger protein 800 XM_006715868.4 91.4% 91.4% 1993_2178del
5 human 168850 ZNF800 zinc finger protein 800 XM_011515859.3 91.4% 91.4% 1993_2178del
6 human 168850 ZNF800 zinc finger protein 800 XM_006715869.4 87% 87% 58_59ins96;1897_2082del
7 mouse 627049 Zfp800 zinc finger protein 800 NM_001081678.1 92.6% 94.2% (many diffs)
8 mouse 627049 Zfp800 zinc finger protein 800 XM_006505151.1 92.6% 94.2% (many diffs)
9 mouse 627049 Zfp800 zinc finger protein 800 XM_006505152.3 92.6% 94.2% (many diffs)
10 mouse 627049 Zfp800 zinc finger protein 800 XM_006505143.2 85.8% 87.3% (many diffs)
11 mouse 627049 Zfp800 zinc finger protein 800 XM_006505144.2 85.8% 87.3% (many diffs)
12 mouse 627049 Zfp800 zinc finger protein 800 XM_006505145.2 85.8% 87.3% (many diffs)
13 mouse 627049 Zfp800 zinc finger protein 800 XM_006505146.3 85.8% 87.3% (many diffs)
14 mouse 627049 Zfp800 zinc finger protein 800 XM_006505147.2 85.8% 87.3% (many diffs)
15 mouse 627049 Zfp800 zinc finger protein 800 XM_006505148.3 85.8% 87.3% (many diffs)
16 mouse 627049 Zfp800 zinc finger protein 800 XM_006505149.2 85.8% 87.3% (many diffs)
17 mouse 627049 Zfp800 zinc finger protein 800 XM_006505150.3 85.8% 87.3% (many diffs)
18 mouse 627049 Zfp800 zinc finger protein 800 XM_011241073.2 85.8% 87.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2061
ORF length:
1992
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCCTTTAAGG GACAAATACT GTCAGACTGA CCACCATCAT CACGGATGCT
121GTGAACCAGT TTATATCCTG GAACCTGGAG ATCCTCCTTT GTTACAGCAA CCACTACAGA
181CATCCAAATC TGGTATTCAA CAAATAATTG AGTGCTTTCG ATCAGGAACT AAACAACTTA
241AGCATATTTT ATTAAAAGAT GTGGACACTA TTTTTGAATG TAAGTTATGC CGCAGTCTCT
301TCAGAGGATT ACCAAATTTA ATTACCCATA AAAAATTCTA CTGCCCACCA AGTCTCCAGA
361TGGATGACAA CCTTCCTGAT GTAAATGATA AACAAAGCCA AGCCATAAAT GATCTCCTAG
421AAGCCATATA TCCAAGTGTG GACAAACGAG AATATATTAT TAAGCTAGAA CCCATAGAAA
481CTAATCAAAA TGCAGTATTT CAATATATTT CGAGGACTGA TAATCCTATT GAAGTCACAG
541AGTCAAGCAG TACTCCTGAA CAAACCGAAG TTCAGATACA GGAAACTAGC ACTGAACAGT
601CAAAAACAGT ACCGGTTACA GATACAGAGG TGGAAACTGT AGAGCCCCCT CCTGTTGAGA
661TTGTTACAGA TGAAGTTGCA CCTACATCTG ATGAACAACC TCAGGAGTCG CAGGCTGACT
721TGGAAACTTC TGACAATTCT GATTTTGGTC ACCAGTTGAT ATGTTGTCTT TGTAGAAAAG
781AATTCAATTC TAGACGAGGT GTTCGCCGTC ACATTCGAAA AGTACACAAG AAAAAGATGG
841AAGAACTAAA AAAGTACATT GAAACACGAA AGAATCCAAA CCAATCCTCT AAAGGACGCA
901GTAAGAATGT TCTAGTTCCA TTAAGTAGGA GTTGTCCAGT ATGTTGTAAA TCATTTGCTA
961CAAAAGCGAA TGTAAGGAGG CATTTTGATG AAGTTCATAG AGGACTAAGG AGGGATTCAA
1021TTACTCCTGA TATAGCAACA AAGCCTGGGC AACCTTTGTT CCTGGATTCT ATTTCTCCTA
1081AAAAATCTTT TAAGACTCGA AAACAAAAGT CTTCTTCAAA GGCTGAATAC AATTTAACTG
1141CATGCAAATG CCTCCTTTGC AAGAGGAAAT ATAGTTCACA AATAATGCTT AAAAGACATA
1201TGCAAATTGT CCACAAGATA ACTCTTTCTG GAACAAACTC TAAAAGAGAA AAAGGCCCTA
1261ATAATACTGC CAACAGTTCA GAAATAAAAG TTAAAGTTGA ACCAGCAGAT TCTGTAGAAT
1321CTTCACCCCC TTCCATTACC CATTCTCCAC AGAATGAATT AAAGGGAACA AATCATTCAA
1381ATGAAAAAAA GAACACACCG GCAGCACAGA AAAATAAAGT TAAACAAGAC TCTGAAAGCC
1441CTAAATCAAC TAGTCCGTCG GCTGCAGGTG GCCAGCAAAA AACCAGAAAA CCAAAACTTT
1501CAGCTGGCTT TGACTTTAAG CAACTTTACT GTAAACTTTG TAAACGTCAG TTTACTTCCA
1561AACAGAACTT GACTAAACAC ATCGAGTTGC ACACAGATGG AAATAACATT TATGTTAAAT
1621TCTACAAGTG TCCTCTTTGC ACTTATGAAA CTCGTCGGAA ACGTGATGTG ATACGACATA
1681TAACTGTGGT TCATAAAAAG TCATCTCGTT ATCTTGGGAA AATAACAGCC AGTTTAGAGA
1741TCAGAGCTAT AAAAAAGCCT ATTGATTTTG TTCTAAATAA AGTGGCAAAA AGAGGCCCTT
1801CGAGGGATGA AGCAAAACAT AGTGATTCAA AACATGATGG CACTTCTAAC TCTCCTAGTA
1861AAAAGTATGA AGTAGCTGAC GTCGGTATTG AAGTAAAAGT CACAAAAAAC TTTTCTCTTC
1921ACAGATGCAA TAAATGTGGA AAGGCATTTG CCAAAAAGAC TTACCTTGAA CATCATAAGA
1981AAACTCATAA GGCAAATGCT TCCAATTCAC CTGAAGGAAA CAAAACCAAA GGCCGAAGTA
2041CAAGATCTAA GGCTCTTGTC TTGCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
2101attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)