Construct: ORF ccsbBroadEn_05258
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF004520.1_s300c1, BRDN0000388796
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- OARD1 (221443)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329684.1 | 100% | 100% | |
| 2 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329685.1 | 100% | 100% | |
| 3 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329686.2 | 100% | 100% | |
| 4 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329688.1 | 100% | 100% | |
| 5 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_145063.3 | 100% | 100% | |
| 6 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329689.1 | 74.3% | 74.3% | 0_1ins117 |
| 7 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329690.1 | 56.5% | 53.2% | 242_243ins113;258_259ins85 |
| 8 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329691.1 | 56.5% | 53.2% | 242_243ins113;258_259ins85 |
| 9 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329692.1 | 56.5% | 53.2% | 242_243ins113;258_259ins85 |
| 10 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329693.1 | 56.5% | 53.2% | 242_243ins113;258_259ins85 |
| 11 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329694.1 | 50.6% | 41.8% | 184_185ins172;231_232ins53 |
| 12 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329695.1 | 50.6% | 41.8% | 184_185ins172;231_232ins53 |
| 13 | human | 221443 | OARD1 | O-acyl-ADP-ribose deacylase 1 | NM_001329696.1 | 50.6% | 41.8% | 184_185ins172;231_232ins53 |
| 14 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | NM_001289490.1 | 91.2% | 95.3% | (many diffs) |
| 15 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | NM_001289491.1 | 91.2% | 95.3% | (many diffs) |
| 16 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | NM_207219.4 | 91.2% | 95.3% | (many diffs) |
| 17 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | XM_006523455.1 | 91.2% | 95.3% | (many diffs) |
| 18 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | XM_006523456.1 | 91.2% | 95.3% | (many diffs) |
| 19 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | XM_006523458.1 | 91.2% | 95.3% | (many diffs) |
| 20 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | XM_006523459.3 | 91.2% | 95.3% | (many diffs) |
| 21 | mouse | 106821 | Oard1 | O-acyl-ADP-ribose deacylase 1 | XM_006523460.3 | 91.2% | 95.3% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 522
- ORF length:
- 456
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG NACAAAAAAG 61 TTGGCATGGC CAGCAGCCTT AATGAAGATC CAGAAGGAAG CAGAATCACT TATGTGAAAG 121 GAGACCTTTT TGCATGCCCG AAAACAGACT CTTTAGCCCA CTGTATCAGT GAGGATTGTC 181 GCATGGGCGC TGGGATAGCT GTCCTCTTTA AGAAGAAATT TGGAGGGGTG CAAGAACTTT 241 TAAATCAACA AAAGAAATCT GGAGAAGTGG CTGTTCTGAA GAGAGATGGG CGATATATAT 301 ATTACTTGAT TACAAAGAAA AGGGCTTCGC ACAAGCCAAC TTATGAAAAC TTACAGAAGA 361 GTTTAGAGGC AATGAAGTCT CATTGTCTGA AGAATGGAGT CACTGACCTC TCCATGCCCA 421 GGATTGGATG TGGTCTTGAT CGTCTGCAAT GGGAAAATGT ATCTGCGATG ATCGAGGAGG 481 TATTTGAGGC AACAGACATC AAAATTACTG TGTACACACT CTGCCCAACT TTCTTGTACA 541 AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac