Construct: ORF ccsbBroadEn_05664

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004281.1_s300c1, BRDN0000392311
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STX19 (415117)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 415117 STX19 syntaxin 19 NM_001001850.3 99.8% 100% 744C>T
2 human 415117 STX19 syntaxin 19 XM_011512842.2 99.8% 100% 744C>T
3 mouse 68159 Stx19 syntaxin 19 NM_026588.1 85% 85.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
948
ORF length:
882
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA AGACCGACTT CAAGAACTAA AGCAGAGAAC AAAGGAAATT GAACTCTCTA
121GAGACAGTCA TGTATCAACT ACAGAAACAG AGGAACAAGG GGTGTTTCTA CAGCAAGCTG
181TTATTTATGA AAGAGAGCCT GTAGCTGAGA GACACCTACA TGAAATCCAA AAACTACAGG
241AAAGTATTAA CAATTTGGCA GATAATGTTC AAAAATTTGG GCAGCAACAG AAAAGTCTGG
301TGGCTTCAAT GAGAAGGTTT AGTCTACTTA AGAGAGAGTC TACCATTACA AAGGAGATAA
361AAATTCAGGC AGAATACATC AACAGAAGTT TGAATGATTT AGTTAAAGAA GTTAAAAAGT
421CAGAGGTTGA AAATGGTCCA TCTTCAGTGG TCACAAGGAT ACTTAAATCT CAGCATGCTG
481CAATGTTCCG CCATTTTCAG CAAATCATGT TTATATACAA TGACACAATA GCAGCAAAGC
541AAGAGAAGTG CAAGACATTT ATTTTACGTC AGCTTGAAGT TGCTGGAAAA GAGATGTCTG
601AAGAAGATGT AAATGATATG CTTCATCAAG GAAAATGGGA AGTTTTTAAT GAAAGCTTAC
661TTACAGAAAT CAATATCACT AAAGCACAAC TTTCAGAGAT TGAACAGAGA CACAAGGAAC
721TTGTTAATTT GGAGAACCAA ATAAAGGATT TAAGGGATCT TTTCATTCAG ATATCTCTTT
781TAGTAGAGGA ACAAGGAGAG AGCATCAATA ATATTGAAAT GACAGTGAAT AGTACAAAAG
841AGTATGTTAA CAATACTAAA GAGAAATTTG GACTAGCTGT AAAATACAAA AAAAGAAATC
901CTTGCAGAGT ACTGTGTTGT TGGTGCTGTC CATGCTGTAG CTCAAAATAC CCAACTTTCT
961TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)