Construct: ORF ccsbBroadEn_05707

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017340.1_s300c1, BRDN0000456352
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF704 (619279)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 619279 ZNF704 zinc finger protein 704 NM_001033723.3 100% 100%
2 human 619279 ZNF704 zinc finger protein 704 XM_017013725.1 98% 98% 1_24del
3 human 619279 ZNF704 zinc finger protein 704 NM_001367783.1 70.3% 70.3% 1_522del
4 human 619279 ZNF704 zinc finger protein 704 XR_928797.2 9.3% 1_863del;2100_13275del
5 mouse 170753 Zfp704 zinc finger protein 704 XM_006530055.3 84.6% 89.1% (many diffs)
6 mouse 170753 Zfp704 zinc finger protein 704 NM_133218.2 61.3% 64.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1305
ORF length:
1236
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GACCTTCACA TTTCAGTCAG AGGACTTAAA ACGTGACTGT GGTAAAAAAA
121TGTCTCATCA ACACGTGTTT TCCTTGGCCA TGGAGGAAGA TGTGAAAACA GCAGACACCA
181AAAAAGCCAG CCGGATCCTT GACCATGAAA AAGAAAACAC TCGCTCCATC TGTCTCCTTG
241AGCAAAAAAG AAAAGTTGTT TCCTCCAACA TTGATGTTCC TCCAGCAAGG AAATCTTCAG
301AGGAACTAGA CATGGACAAG GTGACAGCAG CAATGGTACT AACCAGCTTG TCGACTAGCC
361CTTTGGTTCG AAGTCCTCCC GTGCGGCCGA ACGAGAGCCT CAGCGGATCC TGGAAGGAGG
421GCGGCTGCGT GCCTTCCAGC ACCAGCAGCA GCGGCTACTG GAGCTGGAGC GCCCCCAGCG
481ACCAGTCCAA CCCGTCCACG CCGTCGCCGC CGCTCTCGGC TGACAGCTTC AAGCCCTTCC
541GCAGCCCCGC GCAGCCAGAC GACGGCATCG ACGAGGCGGA GGCCAGCAAC CTGCTCTTCG
601ACGAGCCCAT TCCCAGGAAA AGAAAGAATT CCATGAAGGT GATGTTCAAA TGCCTCTGGA
661AAAACTGTGG GAAGGTGCTG AGCACTGCAG CAGGTATCCA GAAACACATC CGAACCATCC
721ATCTGGGGCG CGTTGGAGAC TCTGACTACA GTGATGGAGA AGAGGACTTT TACTACACTG
781AGATCAAGCT CAACACAGAC TCAGTGGCAG ACGGGCTGAG CAGCCTGGCC CCGGTCTCAC
841CTTCCCAGTC CCTGGCTTCA CCTCCTACTT TCCCCATCCC AGATTCAAGC CGAACAGAAA
901CTCCTTGTGC CAAAACGGAG ACTAAGTTGA TGACGCCGTT GAGCCGCTCA GCTCCCACCA
961CCCTCTACCT CGTGCACACT GACCATGCTT ACCAGGCCAC ACCCCCTGTG ACCATTCCAG
1021GATCGGCCAA GTTCACCCCC AATGGCAGCA GCTTCAGCAT TTCCTGGCAA TCTCCTCCGG
1081TCACTTTCAC AGGCATCCCA GTGTCACCCA CACATCATCC GGTGGGCACA GGAGAGCAGA
1141GACAGCATGC GCACACGGTC CTGTCCTCCC CACCCAGAGG CACAGTCAGC TTAAGGAAGC
1201CCAGGGGAGA GGGCAAAAAG TGTCGGAAGG TGTACGGGAT GGAGAACCGA GACATGTGGT
1261GTACCGCCTG CCGCTGGAAG AAGGCCTGCC AGAGGTTCCT CGACTTGCCA ACTTTCTTGT
1321ACAAAGTTGG cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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