Construct: ORF ccsbBroadEn_05769

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012965.1_s300c1, BRDN0000394766
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACVR2B (93)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93 ACVR2B activin A receptor type 2B NM_001106.4 99.8% 100% 333A>G;1458C>T
2 human 93 ACVR2B activin A receptor type 2B XM_017007515.2 97.2% 95.7% (many diffs)
3 human 93 ACVR2B activin A receptor type 2B XM_017007514.1 96.2% 95.4% (many diffs)
4 human 93 ACVR2B activin A receptor type 2B XM_017007516.1 95.9% 96.3% (many diffs)
5 human 93 ACVR2B activin A receptor type 2B XM_005265583.3 95% 93.9% (many diffs)
6 mouse 11481 Acvr2b activin receptor IIB NM_001313757.1 92.1% 99.4% (many diffs)
7 mouse 11481 Acvr2b activin receptor IIB XM_006511926.3 90.5% 97.8% (many diffs)
8 mouse 11481 Acvr2b activin receptor IIB NM_007397.3 87.9% 94.9% (many diffs)
9 mouse 11481 Acvr2b activin receptor IIB XR_379846.3 13.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1605
ORF length:
1536
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GACGGCGCCC TGGGTGGCCC TCGCCCTCCT CTGGGGATCG CTGTGCGCCG
121GCTCTGGGCG TGGGGAGGCT GAGACACGGG AGTGCATCTA CTACAACGCC AACTGGGAGC
181TGGAGCGCAC CAACCAGAGC GGCCTGGAGC GCTGCGAAGG CGAGCAGGAC AAGCGGCTGC
241ACTGCTACGC CTCCTGGCGC AACAGCTCTG GCACCATCGA GCTCGTGAAG AAGGGCTGCT
301GGCTAGATGA CTTCAACTGC TACGATAGGC AGGAGTGTGT GGCCACTGAG GAGAACCCCC
361AGGTGTACTT CTGCTGCTGT GAAGGCAACT TCTGCAACGA GCGCTTCACT CATTTGCCAG
421AGGCTGGGGG CCCGGAAGTC ACGTACGAGC CACCCCCGAC AGCCCCCACC CTGCTCACGG
481TGCTGGCCTA CTCACTGCTG CCCATCGGGG GCCTTTCCCT CATCGTCCTG CTGGCCTTTT
541GGATGTACCG GCATCGCAAG CCCCCCTACG GTCATGTGGA CATCCATGAG GACCCTGGGC
601CTCCACCACC ATCCCCTCTG GTGGGCCTGA AGCCACTGCA GCTGCTGGAG ATCAAGGCTC
661GGGGGCGCTT TGGCTGTGTC TGGAAGGCCC AGCTCATGAA TGACTTTGTA GCTGTCAAGA
721TCTTCCCACT CCAGGACAAG CAGTCGTGGC AGAGTGAACG GGAGATCTTC AGCACACCTG
781GCATGAAGCA CGAGAACCTG CTACAGTTCA TTGCTGCCGA GAAGCGAGGC TCCAACCTCG
841AAGTAGAGCT GTGGCTCATC ACGGCCTTCC ATGACAAGGG CTCCCTCACG GATTACCTCA
901AGGGGAACAT CATCACATGG AACGAACTGT GTCATGTAGC AGAGACGATG TCACGAGGCC
961TCTCATACCT GCATGAGGAT GTGCCCTGGT GCCGTGGCGA GGGCCACAAG CCGTCTATTG
1021CCCACAGGGA CTTTAAAAGT AAGAATGTAT TGCTGAAGAG CGACCTCACA GCCGTGCTGG
1081CTGACTTTGG CTTGGCTGTT CGATTTGAGC CAGGGAAACC TCCAGGGGAC ACCCACGGAC
1141AGGTAGGCAC GAGACGGTAC ATGGCTCCTG AGGTGCTCGA GGGAGCCATC AACTTCCAGA
1201GAGATGCCTT CCTGCGCATT GACATGTATG CCATGGGGTT GGTGCTGTGG GAGCTTGTGT
1261CTCGCTGCAA GGCTGCAGAC GGACCCGTGG ATGAGTACAT GCTGCCCTTT GAGGAAGAGA
1321TTGGCCAGCA CCCTTCGTTG GAGGAGCTGC AGGAGGTGGT GGTGCACAAG AAGATGAGGC
1381CCACCATTAA AGATCACTGG TTGAAACACC CGGGCCTGGC CCAGCTTTGT GTGACCATCG
1441AGGAGTGCTG GGACCATGAT GCAGAGGCTC GCTTGTCCGC GGGCTGTGTG GAGGAGCGGG
1501TGTCCCTGAT TCGGAGGTCG GTCAATGGCA CTACCTCGGA CTGTCTCGTT TCCCTGGTGA
1561CCTCTGTCAC CAATGTGGAC CTGCCCCCTA AAGAGTCAAG CATCTTGCCA ACTTTCTTGT
1621ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)