Construct: ORF ccsbBroadEn_05873

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010099.1_s300c1, BRDN0000386445
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ATP6V1B2 (526)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 526 ATP6V1B2 ATPase H+ transporting V1 s... NM_001693.4 99.7% 99.2% (many diffs)
2 human 526 ATP6V1B2 ATPase H+ transporting V1 s... XR_002956632.1 17.2% (many diffs)
3 human 526 ATP6V1B2 ATPase H+ transporting V1 s... XR_002956633.1 16.4% (many diffs)
4 mouse 11966 Atp6v1b2 ATPase, H+ transporting, ly... NM_007509.3 89.2% 98.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1599
ORF length:
1533
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GCTGCGGGCG ATGCGGGGGA TTGTCAACGG GGCCGCACCC GAGCTACCCG
121TGCCCACCGG TGGGCCGGCG GNGGGAGCTC AGGAGCAGGC GCTGGCAGTC AGTCGGAACT
181ACCTCTCCCA GCCTCGCCTC ACATACAAGA CAGTATCTGG AGTCAATGGT CCACTAGTGA
241TCTTAGATCA TGTTAAGTTT CCCAGGTATG CTGAAATTGT CCATTTGACC TTACCGGATG
301GCACAAAGAG AAGTGGGCAA GTTCTGGAAG TTAGTGGTTC CAAGGCAGTA GTTCAGGTAT
361TTGAAGGGAC TTCAGGTATA GATGCTAAGA AAACGTCCTG TGAGTTTACT GGGGATATTC
421TCCGAACACC GGTGTCTGAG GATATGCTTG GTCGGGTATT CAATGGATCG GGAAAACCCA
481TTGACAGAGG TCCTGTTGTA CTGGCCGAAG ACTTCCTTGA TATCATGGGT CAGCCAATCA
541ACCCTCAATG TCGAATCTAC CCAGAGGAAA TGATTCGGAC TGGCATTTCG GCCATCGATG
601GGATGAACAG TATTGCTAGG GGGCAGAAAA TTCCTATCTT CTCTGCTGCT GGGCTACCAC
661ACAATGAGAT TGCAGCTCAG ATCTGTCGCC AGGCTGGTTT GGTAAAGAAA TCCAAAGATG
721TAGTAGACTA CAGTGAGGAA AATTTTGCAA TTGTATTTGC TGCTATGGGT GTAAACATGG
781AAACTGCCCG GTTCTTCAAA TCTGACTTTG AAGAAAATGG CTCAATGGAC AATGTCTGCC
841TCTTTTTGAA CTTGGCTAAT GACCCAACCA TTGAGCGAAT TATCACTCCT CGCCTGGCTC
901TAACCACAGC TGAATTTCTG GCGTACCAAT GTGAGAAACA TGTATTGGTT ATTCTAACAG
961ACATGAGTTC TTATGCTGAA GCACTTCGAG AGGTTTCAGC AGCCAGGGAA GAGGTACCTG
1021GTCGACGAGG TTTTCCAGGT TACATGTATA CAGATTTAGC CACGATATAT GAACGCGCTG
1081GGCGAGTGGG AGGGAGAAAC GGCTCGATTA CTCAAATCCC TATTCTAACC ATGCCTAATG
1141ATGATATCAC TCACCCCATC CCAGACTTGA CTGGCTACAT TACAGAGGGG CAGATCTATG
1201TGGACAGACA GCTGCACAAC AGACAGATTT ATCCACCTAT CAATGTGCTG CCCTCACTAT
1261CACGGTTAAT GAAGTCTGCT ATTGGAGAAG GGATGACCAG GAAGGATCAT GCCGATGTAT
1321CTAACCAGCT ATATGCGTGC TATGCTATTG GAAAGGATGT GCAAGCCATG AAAGCTGTCG
1381TTGGAGAAGA AGCCCTTACC TCAGATGATC TTCTCTACTT GGAATTTCTG CAGAAGTTTG
1441AGAGGAACTT CATTGCTCAG GGTCCTTACG AAAATCGCAC TGTCTTTGAG ACTTTGGACA
1501TTGGCTGGCA GCTACTCCGA ATCTTCCCCA AAGAAATGCT GAAGAGAATC CCTCAGAGCA
1561CCCTCAGCGA ATTTTACCCT CGAGACTCTG CAAAGCATTA CCCAACTTTC TTGTACAAAG
1621Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)