Construct: ORF ccsbBroadEn_06586

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015937.1_s300c1, BRDN0000392932
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MLLT3 (4300)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4300 MLLT3 MLLT3 super elongation comp... NM_004529.4 99.7% 99.2% (many diffs)
2 human 4300 MLLT3 MLLT3 super elongation comp... NM_001286691.2 99.1% 98.5% (many diffs)
3 human 4300 MLLT3 MLLT3 super elongation comp... XM_017014726.2 91.2% 90.8% (many diffs)
4 human 4300 MLLT3 MLLT3 super elongation comp... XM_017014727.1 90.7% 90.1% (many diffs)
5 mouse 70122 Mllt3 myeloid/lymphoid or mixed-l... NM_027326.3 92.5% 97.7% (many diffs)
6 mouse 70122 Mllt3 myeloid/lymphoid or mixed-l... XM_006538250.2 91.9% 97% (many diffs)
7 mouse 70122 Mllt3 myeloid/lymphoid or mixed-l... XM_006538253.3 59.5% 63.4% (many diffs)
8 mouse 70122 Mllt3 myeloid/lymphoid or mixed-l... NM_029931.3 25.7% 28.1% (many diffs)
9 mouse 70122 Mllt3 myeloid/lymphoid or mixed-l... NM_001286158.1 21.8% 23.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1770
ORF length:
1704
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TAGCTCGTGG GCCGTGCAGG TGAAGCTGGA GCTGGGGCAC CGCGCCCAGG
121TGAGGAAAAA ACCCACCGTG GAGGGCTTCA CCCACGACTG GATGGTGTTC GTACGCGGTC
181CGGAGCACAG TAACATACAG CACTTTGTGG AGAAAGTCGT CTTCCACTTG CACGAAAGCT
241TTCCTAGGCC AAAAAGAGTG TGCAAAGATC CACCTTACAA AGTAGAAGAA TCTGGGTATG
301CTGGTTTCAT TTTGCCAATT GAAGTTTATT TTAAAAACAA GGAAGAACCT AGGAAAGTCC
361GCTTTGATTA TGACTTATTC CTGCATCTTG AAGGCCATCC ACCAGTGAAT CACCTCCGCT
421GTGAAAAGCT AACTTTCAAC AACCCCACAG AGGACTTTAG GAGAAAGTTG CTGAAGGCAG
481GAGGGGACCC TAATAGGAGT ATTCATACCA GCAGCAGCAG CAGCAGCAGT AGNAGCAGCA
541GCAGCAGCAG CAGCAGCAGC AGCAGTAGCA GCAGCAGCAG CGGCAGCAGC AGCAGCAGTA
601GCAGCAGCAG TAGCAGCAGC AGCAGCAGCA GTAGTACCAG TTTTTCAAAG CCTCACAAAT
661TAATGAAGGA GCACAAGGAA AAACCTTCTA AAGACTCCAG AGAACATAAA AGTGCCTTCA
721AAGAACCTTC CAGGGATCAC AACAAATCTT CCAAAGAATC CTCTAAGAAA CCCAAAGAAA
781ATAAACCACT GAAAGAAGAG AAAATAGTTC CTAAGATGGC CTTCAAGGAA CCTAAACCCA
841TGTCAAAAGA GCCAAAACCA GATAGTAACT TACTCACCAT CACCAGTGGA CAAGATAAGA
901AGGCTCCTAG TAAAAGGCCG CCCATTTCAG ATTCTGAAGA ACTCTCAGCC AAAAAAAGGA
961AAAAGAGTAG CTCAGAGGCT TTATTTAAAA GTTTTTCTAG CGCACCACCA CTGATACTCA
1021CTTGTTCTGC TGACAAAAAA CAGATAAAAG ATAAATCTCA TGTCAAGATG GGAAAGGTCA
1081AAATTGAAAG TGAGACATCA GAGAAGAAGA AATCAACGTT ACCGCCATTT GATGATATTG
1141TGGATCCCAA TGATTCAGAT GTGGAGGAGA ATATATCCTC TAAATCTGAT TCTGAACAAC
1201CCAGTCCTGC CAGCTCCAGC TCCAGCTCCA GCTCCAGCTT CACACCATCC CAGACCAGGC
1261AACAAGGTCC TTTGAGGTCT ATAATGAAAG ATCTGCATTC TGATGACAAT GAGGAGGAAT
1321CAGATGAAGT GGAGGATAAC GACAATGACT CTGAAATGGA GAGGCCTGTA AATAGAGGAG
1381GCAGCCGAAG TCGCAGAGTT AGCTTAAGTG ATGGCAGCGA TAGTGAAAGC AGTTCTGCTT
1441CTTCACCCCT ACATCACGAA CCTCCACCAC CCTTACTAAA AACCAACAAC AACCAGATTC
1501TTGAAGTGAA AAGTCCAATA AAGCAAAGCA AATCAGATAA GCAAATAAAG AATGGTGAAT
1561GTGACAAGGC ATACCTAGAT GAACTGGTAG AGCTTCACAG AAGGTTAATG ACATTGAGAG
1621AAAGACACAT TCTGCAGCAG ATCGTGAACC TTATAGAAGA AACTGGACAC TTTCATATCA
1681CAAACACAAC ATTTGATTTT GATCTTTGCT CGCTGGACAA AACCACAGTC CGTAAACTAC
1741AGAGTTACCT GGAAACAACT GGAACATCCT GCCCAACTTT CTTGTACAAA GTtggcatta
1801taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)