Construct: ORF ccsbBroadEn_06683
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF014220.1_s300c1, BRDN0000456828
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- FURIN (5045)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 5045 | FURIN | furin, paired basic amino a... | NM_001289823.1 | 99.9% | 100% | 1851G>C;1974C>T |
| 2 | human | 5045 | FURIN | furin, paired basic amino a... | NM_001289824.1 | 99.9% | 100% | 1851G>C;1974C>T |
| 3 | human | 5045 | FURIN | furin, paired basic amino a... | NM_002569.4 | 99.9% | 100% | 1851G>C;1974C>T |
| 4 | mouse | 18550 | Furin | furin (paired basic amino a... | NM_001081454.2 | 88.4% | 93.8% | (many diffs) |
| 5 | mouse | 18550 | Furin | furin (paired basic amino a... | NM_011046.3 | 88.4% | 93.8% | (many diffs) |
| 6 | mouse | 18550 | Furin | furin (paired basic amino a... | XM_011250818.1 | 87.3% | 92.6% | (many diffs) |
| 7 | mouse | 18550 | Furin | furin (paired basic amino a... | XM_011250819.2 | 87.3% | 92.6% | (many diffs) |
| 8 | mouse | 18550 | Furin | furin (paired basic amino a... | XM_011250820.2 | 87.3% | 92.6% | (many diffs) |
| 9 | mouse | 18550 | Furin | furin (paired basic amino a... | XM_011250821.2 | 87.3% | 92.6% | (many diffs) |
| 10 | mouse | 18550 | Furin | furin (paired basic amino a... | XM_011250822.2 | 87.3% | 92.6% | (many diffs) |
| 11 | mouse | 18550 | Furin | furin (paired basic amino a... | XM_011250823.1 | 87.3% | 92.6% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 2448
- ORF length:
- 2382
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGGA GCTGAGGCCC TGGTTGCTAT GGGTGGTAGC AGCAACAGGA ACCTTGGTCC 121 TGCTAGCAGC TGATGCTCAG GGCCAGAAGG TCTTCACCAA CACGTGGGCT GTGCGCATCC 181 CTGGAGGCCC AGCGGTGGCC AACAGTGTGG CACGGAAGCA TGGGTTCCTC AACCTGGGCC 241 AGATCTTCGG GGACTATTAC CACTTCTGGC ATCGAGGAGT GACGAAGCGG TCCCTGTCGC 301 CTCACCGCCC GCGGCACAGC CGGCTGCAGA GGGAGCCTCA AGTACAGTGG CTGGAACAGC 361 AGGTGGCAAA GCGACGGACT AAACGGGACG TGTACCAGGA GCCCACAGAC CCCAAGTTTC 421 CTCAGCAGTG GTACCTGTCT GGTGTCACTC AGCGGGACCT GAATGTGAAG GCGGCCTGGG 481 CGCAGGGCTA CACAGGGCAC GGCATTGTGG TCTCCATTCT GGACGATGGC ATCGAGAAGA 541 ACCACCCGGA CTTGGCAGGC AATTATGATC CTGGGGCCAG TTTTGATGTC AATGACCAGG 601 ACCCTGACCC CCAGCCTCGG TACACACAGA TGAATGACAA CAGGCACGGC ACACGGTGTG 661 CGGGGGAAGT GGCTGCGGTG GCCAACAACG GTGTCTGTGG TGTAGGTGTG GCCTACAACG 721 CCCGCATTGG AGGGGTGCGC ATGCTGGATG GCGAGGTGAC AGATGCAGTG GAGGCACGCT 781 CGCTGGGCCT GAACCCCAAC CACATCCACA TCTACAGTGC CAGCTGGGGC CCCGAGGATG 841 ACGGCAAGAC AGTGGATGGG CCAGCCCGCC TCGCCGAGGA GGCCTTCTTC CGTGGGGTTA 901 GCCAGGGCCG AGGGGGGCTG GGCTCCATCT TTGTCTGGGC CTCGGGGAAC GGGGGCCGGG 961 AACATGACAG CTGCAACTGC GACGGCTACA CCAACAGTAT CTACACGCTG TCCATCAGCA 1021 GCGCCACGCA GTTTGGCAAC GTGCCGTGGT ACAGCGAGGC CTGCTCGTCC ACACTGGCCA 1081 CGACCTACAG CAGTGGCAAC CAGAATGAGA AGCAGATCGT GACGACTGAC TTGCGGCAGA 1141 AGTGCACGGA GTCTCACACG GGCACCTCAG CCTCTGCCCC CTTAGCAGCC GGCATCATTG 1201 CTCTCACCCT GGAGGCCAAT AAGAACCTCA CATGGCGGGA CATGCAACAC CTGGTGGTAC 1261 AGACCTCGAA GCCAGCCCAC CTCAATGCCA ACGACTGGGC CACCAATGGT GTGGGCCGGA 1321 AAGTGAGCCA CTCATATGGC TACGGGCTTT TGGACGCAGG CGCCATGGTG GCCCTGGCCC 1381 AGAATTGGAC CACAGTGGCC CCCCAGCGGA AGTGCATCAT CGACATCCTC ACCGAGCCCA 1441 AAGACATCGG GAAACGGCTC GAGGTGCGGA AGACCGTGAC CGCGTGCCTG GGCGAGCCCA 1501 ACCACATCAC TCGGCTGGAG CACGCTCAGG CGCGGCTCAC CCTGTCCTAT AATCGCCGTG 1561 GCGACCTGGC CATCCACCTG GTCAGCCCCA TGGGCACCCG CTCCACCCTG CTGGCAGCCA 1621 GGCCACATGA CTACTCCGCA GATGGGTTTA ATGACTGGGC CTTCATGACA ACTCATTCCT 1681 GGGATGAGGA TCCCTCTGGC GAGTGGGTCC TAGAGATTGA AAACACCAGC GAAGCCAACA 1741 ACTATGGGAC GCTGACCAAG TTCACCCTCG TACTCTATGG CACCGCCCCT GAGGGGCTGC 1801 CCGTACCTCC AGAAAGCAGT GGCTGCAAGA CCCTCACGTC CAGTCAGGCC TGTGTGGTGT 1861 GCGAGGAAGG CTTCTCCCTG CACCAGAAGA GCTGTGTCCA GCACTGCCCT CCAGGCTTCG 1921 CCCCCCAAGT CCTCGATACG CACTATAGCA CCGAGAATGA CGTGGAGACC ATCCGGGCCA 1981 GCGTCTGCGC CCCCTGCCAC GCCTCATGTG CCACATGCCA GGGGCCGGCC CTGACAGATT 2041 GCCTCAGCTG CCCCAGCCAC GCCTCCTTGG ACCCTGTGGA GCAGACTTGC TCCCGGCAAA 2101 GCCAGAGCAG CCGAGAGTCC CCGCCACAGC AGCAGCCACC TCGGCTGCCC CCGGAGGTGG 2161 AGGCGGGGCA ACGGCTGCGG GCAGGGCTGC TGCCCTCACA CCTGCCTGAG GTGGTGGCCG 2221 GCCTCAGCTG CGCCTTCATC GTGCTGGTCT TCGTCACTGT CTTCCTGGTC CTGCAGCTGC 2281 GCTCTGGCTT TAGTTTTCGG GGGGTGAAGG TGTACACCAT GGACCGTGGC CTCATCTCCT 2341 ACAAGGGGCT GCCCCCTGAA GCCTGGCAGG AGGAGTGCCC GTCTGACTCA GAAGAGGACG 2401 AGGGCCGGGG CGAGAGGACC GCCTTTATCA AAGACCAGAG CGCCCTCTGC CCAACTTTCT 2461 TGTACAAAGT TGGcattata agaaagcatt gcttatcaat ttgttgcaac gaac