Construct: ORF ccsbBroadEn_06985

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003103.1_s300c1, BRDN0000396516
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SORD (6652)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6652 SORD sorbitol dehydrogenase NM_003104.6 99.9% 99.7% 806A>C
2 human 653381 SORD2P sorbitol dehydrogenase 2, p... NR_146394.1 41.5% (many diffs)
3 human 653381 SORD2P sorbitol dehydrogenase 2, p... NR_146393.1 38% (many diffs)
4 human 6652 SORD sorbitol dehydrogenase NR_034039.2 21.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1137
ORF length:
1071
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGCGGCGGCC AAGCCCAACA ACCTTTCCCT GGTGGTGCAC GGACCGGGGG
121ACTTGCGCCT GGAGAACTAT CCTATCCCTG AACCAGGCCC AAATGAGGTC TTGCTGAGGA
181TGCATTCTGT TGGAATCTGT GGCTCAGATG TCCACTACTG GGAGTATGGT CGAATTGGGA
241ATTTTATTGT GAAAAAGCCC ATGGTGCTGG GACATGAAGC TTCGGGAACA GTCGAAAAAG
301TGGGATCATC GGTAAAGCAC CTAAAACCAG GTGATCGTGT TGCCATCGAG CCTGGTGCTC
361CCCGAGAAAA TGATGAATTC TGCAAGATGG GCCGATACAA TCTGTCACCT TCCATCTTCT
421TCTGTGCCAC GCCCCCCGAT GACGGGAACC TCTGCCGGTT CTATAAGCAC AATGCAGCCT
481TTTGTTACAA GCTTCCTGAC AATGTCACCT TTGAGGAAGG CGCCCTGATC GAGCCACTTT
541CTGTGGGGAT CCATGCCTGC AGGAGAGGCG GAGTTACCCT GGGACACAAG GTCCTTGTGT
601GTGGAGCTGG GCCAATCGGG ATGGTCACTT TGCTCGTGGC CAAAGCAATG GGAGCAGCTC
661AAGTAGTGGT GACTGATCTG TCTGCTACCC GATTGTCCAA AGCCAAGGAG ATTGGGGCTG
721ATTTAGTCCT CCAGATCTCC AAGGAGAGCC CTCAGGAAAT CGCCAGGAAA GTAGAAGGTC
781AGCTGGGGTG CAAGCCGGAA GTCACCATCG AGTGCACGGG GGCAGAGGCC TCCATCCAGG
841CGGGCATCTA CGCCACTCGC TCTGGTGGGA CCCTCGTGCT TGTGGGGCTG GGCTCTGAGA
901TGACCACCGT ACCCCTACTG CATGCAGCCA TCCGGGAGGT GGATATCAAG GGCGTGTTTC
961GATACTGCAA CACGTGGCCA GTGGCGATTT CGATGCTTGC GTCCAAGTCT GTGAATGTAA
1021AACCCCTCGT CACCCATAGG TTTCCTCTGG AGAAAGCTCT GGAGGCCTTT GAAACATTTA
1081AAAAGGGATT GGGGTTGAAA ATCATGCTCA AGTGTGACCC CAGTGACCAG AATCCCTGCC
1141CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1201aac

Download FASTA (ORF) (Full)