Construct: ORF ccsbBroadEn_07061

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009298.1_s300c1, BRDN0000393210
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TGM2 (7052)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7052 TGM2 transglutaminase 2 NM_198951.3 99.9% 100% 936C>A
2 human 7052 TGM2 transglutaminase 2 NM_001323316.2 78.6% 78.2% (many diffs)
3 human 7052 TGM2 transglutaminase 2 NM_004613.4 78.6% 78.2% (many diffs)
4 human 7052 TGM2 transglutaminase 2 XM_011529028.1 78.6% 78.2% (many diffs)
5 human 7052 TGM2 transglutaminase 2 NM_001323318.2 69.6% 69.1% (many diffs)
6 human 7052 TGM2 transglutaminase 2 NM_001323317.2 66.9% 66.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1710
ORF length:
1644
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGAGGAGCTG GTCTTAGAGA GGTGTGATCT GGAGCTGGAG ACCAATGGCC
121GAGACCACCA CACGGCCGAC CTGTGCCGGG AGAAGCTGGT GGTGCGACGG GGCCAGCCCT
181TCTGGCTGAC CCTGCACTTT GAGGGCCGCA ACTACGAGGC CAGTGTAGAC AGTCTCACCT
241TCAGTGTCGT GACCGGCCCA GCCCCTAGCC AGGAGGCCGG GACCAAGGCC CGTTTTCCAC
301TAAGAGATGC TGTGGAGGAG GGTGACTGGA CAGCCACCGT GGTGGACCAG CAAGACTGCA
361CCCTCTCGCT GCAGCTCACC ACCCCGGCCA ACGCCCCCAT CGGCCTGTAT CGCCTCAGCC
421TGGAGGCCTC CACTGGCTAC CAGGGATCCA GCTTTGTGCT GGGCCACTTC ATTTTGCTCT
481TCAACGCCTG GTGCCCAGCG GATGCTGTGT ACCTGGACTC GGAAGAGGAG CGGCAGGAGT
541ATGTCCTCAC CCAGCAGGGC TTTATCTACC AGGGCTCGGC CAAGTTCATC AAGAACATAC
601CTTGGAATTT TGGGCAGTTT GAAGATGGGA TCCTAGACAT CTGCCTGATC CTTCTAGATG
661TCAACCCCAA GTTCCTGAAG AACGCCGGCC GTGACTGCTC CCGCCGCAGC AGCCCCGTCT
721ACGTGGGCCG GGTGGTGAGT GGCATGGTCA ACTGCAACGA TGACCAGGGT GTGCTGCTGG
781GACGCTGGGA CAACAACTAC GGGGACGGCG TCAGCCCCAT GTCCTGGATC GGCAGCGTGG
841ACATCCTGCG GCGCTGGAAG AACCACGGCT GCCAGCGCGT CAAGTATGGC CAGTGCTGGG
901TCTTCGCCGC CGTGGCCTGC ACAGTGCTGA GGTGCCTGGG CATCCCTACC CGCGTCGTGA
961CCAACTACAA CTCGGCCCAT GACCAGAACA GCAACCTTCT AATCGAGTAC TTCCGCAATG
1021AGTTTGGGGA GATCCAGGGT GACAAGAGCG AGATGATCTG GAACTTCCAC TGCTGGGTGG
1081AGTCGTGGAT GACCAGGCCG GACCTGCAGC CGGGGTACGA GGGCTGGCAG GCCCTGGACC
1141CAACGCCCCA GGAGAAGAGC GAAGGGACGT ACTGCTGTGG CCCAGTTCCA GTTCGTGCCA
1201TCAAGGAGGG CGACCTGAGC ACCAAGTACG ATGCGCCCTT TGTCTTTGCG GAGGTCAATG
1261CCGACGTGGT AGACTGGATC CAGCAGGACG ATGGGTCTGT GCACAAATCC ATCAACCGTT
1321CCCTGATCGT TGGGCTGAAG ATCAGCACTA AGAGCGTGGG CCGAGACGAG CGGGAGGATA
1381TCACCCACAC CTACAAATAC CCAGAGGGGT CCTCAGAGGA GAGGGAGGCC TTCACAAGGG
1441CGAACCACCT GAACAAACTG GCCGAGAAGG AGGAGACAGG GATGGCCATG CGGATCCGTG
1501TGGGCCAGAG CATGAACATG GGCAGTGACT TTGACGTCTT TGCCCACATC ACCAACAACA
1561CCGCTGAGGA GTACGTCTGC CGCCTCCTGC TCTGTGCCCG CACCGTCAGC TACAATGGGA
1621TCTTGGGGCC CGAGTGTGGC ACCAAGTACC TGCTCAACCT CAACCTGGAG CCTTTCTCTG
1681GTAAAGCCCT GTGTTCCTGG AGCATTTGTT GCCCAACTTT CTTGTACAAA GTtggcatta
1741taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)