Construct: ORF ccsbBroadEn_07251

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007742.1_s300c1, BRDN0000391206
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNAB2 (8514)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8514 KCNAB2 potassium voltage-gated cha... NM_001199860.2 99.9% 100% 1032A>G
2 human 8514 KCNAB2 potassium voltage-gated cha... NM_001199861.2 99.9% 100% 1032A>G
3 human 8514 KCNAB2 potassium voltage-gated cha... NM_003636.4 99.9% 100% 1032A>G
4 human 8514 KCNAB2 potassium voltage-gated cha... NM_172130.3 96% 96.1% 72_73ins42;990A>G
5 human 8514 KCNAB2 potassium voltage-gated cha... XM_005263514.3 96% 96.1% 72_73ins42;990A>G
6 human 8514 KCNAB2 potassium voltage-gated cha... XM_011542321.3 89.8% 86.7% (many diffs)
7 human 8514 KCNAB2 potassium voltage-gated cha... XM_011542322.2 89.8% 86.7% (many diffs)
8 human 8514 KCNAB2 potassium voltage-gated cha... XM_017002620.1 88% 79.5% (many diffs)
9 human 8514 KCNAB2 potassium voltage-gated cha... NM_001199862.2 84.8% 76.8% (many diffs)
10 human 8514 KCNAB2 potassium voltage-gated cha... XM_017002618.2 83.8% 75.9% (many diffs)
11 human 8514 KCNAB2 potassium voltage-gated cha... XM_017002619.1 83.8% 75.9% (many diffs)
12 human 8514 KCNAB2 potassium voltage-gated cha... NM_001199863.2 81.6% 81.7% 0_1ins201;831A>G
13 human 8514 KCNAB2 potassium voltage-gated cha... XM_017002621.2 80.9% 73.4% (many diffs)
14 mouse 16498 Kcnab2 potassium voltage-gated cha... NM_001252656.1 90.8% 98.9% (many diffs)
15 mouse 16498 Kcnab2 potassium voltage-gated cha... NM_010598.3 90.8% 98.9% (many diffs)
16 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_017319996.1 90.8% 98.9% (many diffs)
17 mouse 16498 Kcnab2 potassium voltage-gated cha... NM_001252654.1 87.1% 95% (many diffs)
18 mouse 16498 Kcnab2 potassium voltage-gated cha... NM_001252655.1 87.1% 95% (many diffs)
19 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_006538583.3 87% 94.7% (many diffs)
20 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_006538584.3 87% 94.7% (many diffs)
21 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_006538585.3 87% 94.7% (many diffs)
22 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_011250199.2 87% 94.7% (many diffs)
23 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_006538586.3 83.4% 91.1% (many diffs)
24 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_006538587.3 83.4% 91.1% (many diffs)
25 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_011250198.2 81.5% 79.2% (many diffs)
26 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_011250197.2 78.4% 76.3% (many diffs)
27 mouse 16498 Kcnab2 potassium voltage-gated cha... XM_017319997.1 70.7% 77.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1170
ORF length:
1101
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTATCCAGAA TCAACGACGG GCTCCCCGGC TCGGCTCTCG CTGCGGCAGA
121CGGGCTCCCC CGGGATGATC TACAGTACTC GGTATGGGAG TCCCAAAAGA CAGCTCCAGT
181TTTACAGGAA CCTGGGCAAG TCTGGCCTGC GGGTCTCCTG CCTGGGACTT GGAACATGGG
241TGACCTTCGG AGGCCAGATC ACCGATGAGA TGGCAGAGCA GCTCATGACC TTGGCCTATG
301ATAATGGCAT CAACCTCTTC GATACAGCAG AAGTCTACGC AGCCGGCAAG GCTGAAGTGG
361TACTGGGAAA CATCATTAAG AAGAAAGGAT GGAGGCGGTC CAGCCTCGTC ATCACCACCA
421AGATCTTCTG GGGCGGAAAG GCGGAGACGG AGCGGGGCCT GTCCAGGAAG CACATAATCG
481AAGGTCTGAA AGCTTCCCTG GAGCGACTGC AGCTGGAGTA CGTGGATGTG GTGTTTGCCA
541ACCGCCCGGA CCCCAACACC CCGATGGAAG AGACCGTCCG CGCCATGACC CACGTCATCA
601ACCAGGGGAT GGCCATGTAC TGGGGCACGT CACGCTGGAG CTCCATGGAG ATCATGGAGG
661CCTACTCCGT GGCCCGGCAG TTCAACCTGA CCCCGCCCAT CTGCGAGCAG GCTGAGTACC
721ACATGTTCCA GCGTGAGAAA GTGGAGGTGC AGCTGCCGGA GCTGTTCCAC AAGATAGGAG
781TGGGCGCCAT GACCTGGTCC CCTCTGGCCT GTGGCATTGT TTCTGGCAAG TACGACAGTG
841GCATCCCACC CTACTCAAGA GCCTCCTTGA AGGGCTACCA GTGGCTGAAG GACAAGATCC
901TCAGTGAGGA GGGCCGGCGC CAGCAAGCCA AGCTGAAGGA GCTGCAGGCC ATCGCCGAGC
961GCCTGGGCTG CACCCTGCCC CAGCTGGCCA TAGCCTGGTG CCTGAGGAAT GAGGGAGTCA
1021GCTCCGTGCT CCTGGGGGCC TCCAATGCGG ACCAGCTCAT GGAGAACATT GGGGCAATAC
1081AGGTCCTTCC GAAACTGTCG TCTTCCATTA TCCACGAGAT TGATAGTATT TTGGGCAATA
1141AACCCTACAG CAAAAAGGAC TACAGATCCT TGCCAACTTT CTTGTACAAA GTtggcatta
1201taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)