Construct: ORF ccsbBroadEn_07470

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012787.1_s300c1, BRDN0000397088
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RIMS2 (9699)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9699 RIMS2 regulating synaptic membran... NM_014677.5 99.9% 99.8% 257C>T;884A>G;1920C>G
2 human 9699 RIMS2 regulating synaptic membran... NM_001348499.2 98% 97.8% (many diffs)
3 human 9699 RIMS2 regulating synaptic membran... NM_001348506.2 98% 97.9% (many diffs)
4 human 9699 RIMS2 regulating synaptic membran... NM_001348508.2 97.1% 96.9% (many diffs)
5 human 9699 RIMS2 regulating synaptic membran... NM_001348507.2 96.6% 96.6% (many diffs)
6 human 9699 RIMS2 regulating synaptic membran... NM_001348505.2 95.4% 94.5% (many diffs)
7 human 9699 RIMS2 regulating synaptic membran... NM_001348500.2 94.7% 94.6% (many diffs)
8 human 9699 RIMS2 regulating synaptic membran... NM_001282881.2 93.5% 92.7% (many diffs)
9 human 9699 RIMS2 regulating synaptic membran... NM_001348502.2 92.8% 92.7% (many diffs)
10 human 9699 RIMS2 regulating synaptic membran... NM_001348504.2 90.7% 90.5% (many diffs)
11 human 9699 RIMS2 regulating synaptic membran... NM_001348501.2 87.8% 79.4% (many diffs)
12 human 9699 RIMS2 regulating synaptic membran... NM_001348509.2 85.6% 85.5% (many diffs)
13 human 9699 RIMS2 regulating synaptic membran... XM_017014036.1 85.6% 85.4% (many diffs)
14 human 9699 RIMS2 regulating synaptic membran... NM_001348503.2 84.6% 84.6% (many diffs)
15 human 9699 RIMS2 regulating synaptic membran... NM_001348498.2 84.6% 84.5% (many diffs)
16 human 9699 RIMS2 regulating synaptic membran... NM_001348487.2 83.5% 83% (many diffs)
17 human 9699 RIMS2 regulating synaptic membran... XM_017014034.2 82.6% 82.1% (many diffs)
18 human 9699 RIMS2 regulating synaptic membran... NM_001348493.2 82.2% 81.7% (many diffs)
19 human 9699 RIMS2 regulating synaptic membran... NM_001348496.2 81.9% 81.4% (many diffs)
20 human 9699 RIMS2 regulating synaptic membran... NM_001348492.2 81.3% 80.7% (many diffs)
21 human 9699 RIMS2 regulating synaptic membran... NM_001100117.3 81.2% 80.7% (many diffs)
22 human 9699 RIMS2 regulating synaptic membran... NM_001348495.2 80.8% 78.4% (many diffs)
23 human 9699 RIMS2 regulating synaptic membran... XM_017014027.2 80.5% 78.2% (many diffs)
24 human 9699 RIMS2 regulating synaptic membran... NM_001348494.2 80.5% 79.3% (many diffs)
25 human 9699 RIMS2 regulating synaptic membran... NM_001348486.2 80.2% 79.1% (many diffs)
26 human 9699 RIMS2 regulating synaptic membran... NM_001348488.2 79.6% 79.1% (many diffs)
27 human 9699 RIMS2 regulating synaptic membran... XM_017014022.1 78.1% 77.4% (many diffs)
28 human 9699 RIMS2 regulating synaptic membran... XM_017014028.2 78% 75.8% (many diffs)
29 human 9699 RIMS2 regulating synaptic membran... NM_001348485.2 77.8% 77.2% (many diffs)
30 human 9699 RIMS2 regulating synaptic membran... XM_024447347.1 77.4% 74.5% (many diffs)
31 human 9699 RIMS2 regulating synaptic membran... XM_017014023.2 76.8% 73.9% (many diffs)
32 human 9699 RIMS2 regulating synaptic membran... NM_001348491.2 76.7% 75.6% (many diffs)
33 human 9699 RIMS2 regulating synaptic membran... XM_011517398.3 76.6% 73.8% (many diffs)
34 human 9699 RIMS2 regulating synaptic membran... XM_017014024.2 75.1% 72.3% (many diffs)
35 human 9699 RIMS2 regulating synaptic membran... NM_001348497.2 74.1% 72.8% (many diffs)
36 human 9699 RIMS2 regulating synaptic membran... NM_001348489.2 73.3% 72.8% (many diffs)
37 human 9699 RIMS2 regulating synaptic membran... XM_017014021.2 72.7% 64.6% (many diffs)
38 human 9699 RIMS2 regulating synaptic membran... NM_001348490.2 72.3% 71.8% (many diffs)
39 human 9699 RIMS2 regulating synaptic membran... XM_005251106.3 71.7% 70.6% (many diffs)
40 human 9699 RIMS2 regulating synaptic membran... XM_017014019.2 71.1% 70.5% (many diffs)
41 human 9699 RIMS2 regulating synaptic membran... XM_017014017.2 70.4% 68.4% (many diffs)
42 human 9699 RIMS2 regulating synaptic membran... XM_005251107.3 70.3% 69.2% (many diffs)
43 human 9699 RIMS2 regulating synaptic membran... XM_017014016.2 69.9% 68% (many diffs)
44 human 9699 RIMS2 regulating synaptic membran... XM_017014015.2 69.7% 67.7% (many diffs)
45 human 9699 RIMS2 regulating synaptic membran... XM_017014014.1 69.2% 68.6% (many diffs)
46 human 9699 RIMS2 regulating synaptic membran... XM_024447346.1 68.9% 60.7% (many diffs)
47 human 9699 RIMS2 regulating synaptic membran... XM_024447343.1 68.4% 65.9% (many diffs)
48 human 9699 RIMS2 regulating synaptic membran... NM_001348484.2 68% 66.9% (many diffs)
49 human 9699 RIMS2 regulating synaptic membran... XM_024447342.1 68% 65.5% (many diffs)
50 human 9699 RIMS2 regulating synaptic membran... XM_017014012.2 67.9% 65.4% (many diffs)
51 human 9699 RIMS2 regulating synaptic membran... XM_017014010.2 67.6% 60.1% (many diffs)
52 human 9699 RIMS2 regulating synaptic membran... XM_017014007.2 67.5% 65% (many diffs)
53 human 9699 RIMS2 regulating synaptic membran... XM_017014011.2 67.5% 65% (many diffs)
54 human 9699 RIMS2 regulating synaptic membran... XM_024447345.1 67.3% 64.8% (many diffs)
55 human 9699 RIMS2 regulating synaptic membran... XM_017014009.2 66.8% 64.4% (many diffs)
56 human 9699 RIMS2 regulating synaptic membran... XM_024447344.1 66.6% 64.2% (many diffs)
57 human 9699 RIMS2 regulating synaptic membran... XM_017014008.2 65.3% 57.5% (many diffs)
58 human 9699 RIMS2 regulating synaptic membran... XM_017014006.2 64.2% 61.9% (many diffs)
59 human 9699 RIMS2 regulating synaptic membran... XM_011517395.3 64% 61.7% (many diffs)
60 human 9699 RIMS2 regulating synaptic membran... NR_145711.2 39.5% (many diffs)
61 human 9699 RIMS2 regulating synaptic membran... NR_145710.2 36.8% (many diffs)
62 human 9699 RIMS2 regulating synaptic membran... XM_006716698.3 25% 21.1% (many diffs)
63 human 9699 RIMS2 regulating synaptic membran... NM_001282882.1 23.4% 21.2% (many diffs)
64 mouse 116838 Rims2 regulating synaptic membran... XM_017316409.1 89.9% 95.6% (many diffs)
65 mouse 116838 Rims2 regulating synaptic membran... XM_006520343.3 89.8% 95.5% (many diffs)
66 mouse 116838 Rims2 regulating synaptic membran... XM_017316407.1 89.1% 94.7% (many diffs)
67 mouse 116838 Rims2 regulating synaptic membran... XM_017316406.1 88.6% 94.2% (many diffs)
68 mouse 116838 Rims2 regulating synaptic membran... XM_017316405.1 88.3% 93.9% (many diffs)
69 mouse 116838 Rims2 regulating synaptic membran... XM_017316412.1 88.1% 93.7% (many diffs)
70 mouse 116838 Rims2 regulating synaptic membran... XM_017316403.1 87.6% 93.1% (many diffs)
71 mouse 116838 Rims2 regulating synaptic membran... XM_017316411.1 87.4% 92.9% (many diffs)
72 mouse 116838 Rims2 regulating synaptic membran... XM_017316401.1 87.1% 92.6% (many diffs)
73 mouse 116838 Rims2 regulating synaptic membran... XM_017316410.1 86.9% 92.4% (many diffs)
74 mouse 116838 Rims2 regulating synaptic membran... XM_017316408.1 85.9% 91.3% (many diffs)
75 mouse 116838 Rims2 regulating synaptic membran... XM_017316400.1 85.4% 90% (many diffs)
76 mouse 116838 Rims2 regulating synaptic membran... XM_017316404.1 84.4% 89.1% (many diffs)
77 mouse 116838 Rims2 regulating synaptic membran... XM_017316399.1 84.3% 88.9% (many diffs)
78 mouse 116838 Rims2 regulating synaptic membran... XM_017316402.1 83.7% 88.3% (many diffs)
79 mouse 116838 Rims2 regulating synaptic membran... XM_017316397.1 78.2% 83.2% (many diffs)
80 mouse 116838 Rims2 regulating synaptic membran... XM_017316398.1 76.7% 81.6% (many diffs)
81 mouse 116838 Rims2 regulating synaptic membran... XM_017316389.1 75.7% 80.4% (many diffs)
82 mouse 116838 Rims2 regulating synaptic membran... XM_017316392.1 74.8% 77.8% (many diffs)
83 mouse 116838 Rims2 regulating synaptic membran... XM_017316387.1 74.8% 79.5% (many diffs)
84 mouse 116838 Rims2 regulating synaptic membran... XM_017316391.1 74.6% 77.6% (many diffs)
85 mouse 116838 Rims2 regulating synaptic membran... XM_017316394.1 74.1% 78.8% (many diffs)
86 mouse 116838 Rims2 regulating synaptic membran... XM_017316390.1 74.1% 77% (many diffs)
87 mouse 116838 Rims2 regulating synaptic membran... XM_017316385.1 73.7% 78.4% (many diffs)
88 mouse 116838 Rims2 regulating synaptic membran... XM_017316384.1 73.4% 77.4% (many diffs)
89 mouse 116838 Rims2 regulating synaptic membran... XM_017316396.1 73.1% 76.1% (many diffs)
90 mouse 116838 Rims2 regulating synaptic membran... XM_017316386.1 72.7% 75.6% (many diffs)
91 mouse 116838 Rims2 regulating synaptic membran... XM_017316395.1 72.7% 75.5% (many diffs)
92 mouse 116838 Rims2 regulating synaptic membran... XM_017316393.1 72.5% 75.5% (many diffs)
93 mouse 116838 Rims2 regulating synaptic membran... XM_017316388.1 70.7% 73% (many diffs)
94 mouse 116838 Rims2 regulating synaptic membran... XM_017316383.1 65.9% 68.6% (many diffs)
95 mouse 116838 Rims2 regulating synaptic membran... XM_017316382.1 65.7% 68.3% (many diffs)
96 mouse 116838 Rims2 regulating synaptic membran... XM_011245444.2 65.5% 68.1% (many diffs)
97 mouse 116838 Rims2 regulating synaptic membran... XM_011245434.2 65.3% 61.4% (many diffs)
98 mouse 116838 Rims2 regulating synaptic membran... XM_017316379.1 64.8% 67.5% (many diffs)
99 mouse 116838 Rims2 regulating synaptic membran... XM_017316380.1 64.8% 67.4% (many diffs)
100 mouse 116838 Rims2 regulating synaptic membran... NM_001256382.1 64.7% 66.8% (many diffs)
101 mouse 116838 Rims2 regulating synaptic membran... XM_017316377.1 64.4% 67% (many diffs)
102 mouse 116838 Rims2 regulating synaptic membran... XM_017316378.1 64.3% 66.4% (many diffs)
103 mouse 116838 Rims2 regulating synaptic membran... XM_017316376.1 64.3% 66.9% (many diffs)
104 mouse 116838 Rims2 regulating synaptic membran... XM_017316375.1 64% 66.6% (many diffs)
105 mouse 116838 Rims2 regulating synaptic membran... NM_053271.2 64% 60.3% (many diffs)
106 mouse 116838 Rims2 regulating synaptic membran... XM_011245432.2 63.9% 66.6% (many diffs)
107 mouse 116838 Rims2 regulating synaptic membran... XM_017316373.1 63.8% 66.4% (many diffs)
108 mouse 116838 Rims2 regulating synaptic membran... XM_017316374.1 63.8% 66.3% (many diffs)
109 mouse 116838 Rims2 regulating synaptic membran... NM_001256383.1 63.5% 65.5% (many diffs)
110 mouse 116838 Rims2 regulating synaptic membran... XM_017316381.1 63.1% 65.1% (many diffs)
111 mouse 116838 Rims2 regulating synaptic membran... XM_017316372.1 63% 65.6% (many diffs)
112 mouse 116838 Rims2 regulating synaptic membran... XM_017316371.1 62.4% 64.4% (many diffs)
113 mouse 116838 Rims2 regulating synaptic membran... XM_017316370.1 61.8% 63.8% (many diffs)
114 mouse 116838 Rims2 regulating synaptic membran... XM_017316369.1 61.7% 63.6% (many diffs)
115 mouse 116838 Rims2 regulating synaptic membran... NM_001256384.1 21.1% 21% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3555
ORF length:
3489
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCA ATTTGAGACA TTGCGCCAGG TCTGCAATTC TGTTTTATCT CATTTTCATG
121GGGTTTTTTC ATCCCCACCA AATATCTTAC AAAATGAGCT TTTTGGACAA ACACTGAACA
181ATGCAAGGAA AAGAAGCCCA TCTGTGTCCA GAGATCAGAA TAGAAGATAC GACCAAAGGG
241AAGAAAGAGA GGAATATTCA CAGTATGCTA CTTCGGATAC CGCAATGCCT AGATCTCCAT
301CAGATTATGC TGATAGGCGA TTTCAACATG AACCTCAGTT TTATGAAGAC TCTGATCATT
361TAAGTTATAG GGACTCCAAC AGGAGAAGTC ATAGGCATTC CAAAGAATAT ATTGTAGATG
421ATGAGGATGT GGAAAGCAGA GATGAATACG AAAGGCAAAG GAGAGAGGAA GAGTACCAGT
481CACGCTACCG AAGTGATCCG AATTTGGCCC GTTATCCAGT AAAGCCACAA CCCTATGAAG
541AACAAATGCG GATCCATGCT GAAGTGTCCC GAGCACGGCA TGAGAGAAGG CATAGTGATG
601TTTCTTTGGC AAATGCTGAT CTGGAAGATT CCAGGATTTC TATGCTAAGG ATGGATCGAC
661CATCAAGGCA AAGATCTATA TCAGAACGTA GAGCTGCCAT GGAAAATCAG CGATCTTATT
721CAATGGAAAG AACTCGAGAG GCTCAGGGAC CAAGTTCTTA TGCACAAAGG ACCACAAACC
781ATAGTCCTCC TACCCCCAGG AGGAGTCCAC TACCCATAGA TAGACCAGAC TTGAGGCGTA
841CTGACTCACT ACGGAAACAG CACCACTTAG ATCCTAGCTC TGCTGTAAGA AAAACAAAAC
901GGGAAAAAAT GGAAACAATG TTAAGGAATG ATTCTCTCAG TTCAGACCGG TCAGAGTCAG
961TGAGACCTCC ACCACCAAAG CCTCATAAAT CAAAGAAAGG CGGTAAAATG CGCCAGATTT
1021CGTTGAGCAG TTCAGAGGAG GAATTGGCTT CCACGCCTGA ATATACAAGT TGTGATGATG
1081TTGAGATTGA AAGTGAGAGT GTAAGTGAAA AAGGAGACAT GGATTACAAC TGGTTGGATC
1141ATACGTCTTG GCATAGCAGT GAGGCATCCC CAATGTCTTT GCACCCTGTA ACCTGGCAAC
1201CATCTAAAGA TGGAGATCGT TTAATTGGTC GCATTTTATT AAATAAGCGT CTAAAAGATG
1261GAAGTGTACC TCGAGATTCA GGAGCAATGC TTGGCTTGAA GGTTGTAGGA GGAAAGATGA
1321CTGAATCAGG TCGGCTTTGT GCATTTATTA CTAAAGTAAA AAAAGGAAGT TTAGCTGATA
1381CTGTAGGACA TCTTAGACCA GGTGATGAAG TATTAGAATG GAATGGAAGA CTACTGCAAG
1441GAGCCACATT TGAGGAAGTG TACAACATCA TTCTAGAATC CAAACCTGAA CCACAAGTAG
1501AACTTGTAGT TTCAAGGCCT ATTGGAGATA TACCGCGAAT ACCTGATAGC ACACATGCAC
1561AACTGGAGTC CAGTTCTAGC TCCTTTGAAT CTCAAAAAAT GGATCGTCCT TCTATTTCTG
1621TTACCTCTCC CATGAGTCCT GGAATGTTGA GGGATGTCCC ACAGTTCTTA TCAGGACAAC
1681TTTCAATAAA ACTATGGTTT GACAAGGTTG GTCACCAATT AATAGTTACA ATTTTGGGAG
1741CAAAAGATCT CCCTTCCAGG GAAGATGGGA GGCCAAGGAA TCCTTATGTT AAAATTTACT
1801TTCTTCCAGA CAGAAGTGAT AAAAACAAGA GAAGAACTAA AACAGTAAAG AAAACATTGG
1861AACCCAAATG GAACCAAACA TTCATTTATT CTCCAGTCCA CCGAAGAGAA TTTCGGGAAC
1921GAATGCTAGA GATTACCCTT TGGGATCAAG CTCGTGTTCG AGAGGAAGAA AGTGAATTCT
1981TAGGGGAGAT TTTAATTGAA TTAGAAACAG CATTATTAGA TGATGAGCCA CATTGGTACA
2041AACTTCAGAC GCATGATGTC TCTTCATTGC CACTTCCCCA CCCTTCTCCA TATATGCCAC
2101GAAGACAGCT CCATGGAGAG AGCCCAACAC GGAGGTTGCA AAGGTCAAAG AGAATAAGTG
2161ATAGTGAAGT CTCTGACTAT GACTGTGATG ATGGAATTGG TGTAGTATCA GATTATCGAC
2221ATGATGGTCG AGATCTTCAA AGCTCAACAT TATCAGTGCC AGAACAAGTA ATGTCATCAA
2281ACCACTGTTC ACCATCAGGG TCTCCTCATC GAGTAGATGT TATAGGAAGG ACTAGATCAT
2341GGTCACCCAG TGTCCCTCCT CCACAAAGTC GGAATGTGGA ACAGGGGCTT CGAGGGACCC
2401GCACTATGAC CGGACATTAT AATACAATTA GCCGAATGGA CAGACATCGT GTCATGGATG
2461ACCATTATTC TCCAGATAGA GACAGTCATT TTCTTACTCT ACCTCGCTCC AGATACAGTC
2521AGACCATTGA CCATCATCAC AGGGATGGCA GGGATTGTGA AGCAGCAGAT AGACAGCCAT
2581ATCACAGATC CAGATCAACA GAACAACGGC CTCTCCTTGA GCGGACCACC ACCCGCTCCA
2641GATCCACTGA ACGTCCTGAT ACAAACCTCA TGAGGTCGAT GCCTTCATTA ATGACTGGAA
2701GATCTGCCCC TCCTTCACCT GCCTTATCGA GGTCTCATCC TCGTACTGGG TCTGTCCAGA
2761CAAGCCCATC AAGTACTCCA GTCGCAGGAC GAAGGGGCCG ACAGCTTCCA CAGCTTCCAC
2821CAAAGGGAAC GTTGGATAGA AAAGCAGGAG GTAAAAAACT AAGGAGCACT GTCCAAAGAA
2881GTACAGAAAC AGGCCTGGCC GTGGAAATGA GGAACTGGAT GACTCGACAG GCAAGCCGAG
2941AGTCTACAGA TGGTAGCATG AACAGCTACA GCTCAGAAGG AAATCTGATT TTCCCTGGTG
3001TTCGCTTGGC CTCTGATAGC CAGTTCAGTG ATTTCCTGGA TGGCCTTGGC CCTGCTCAGC
3061TAGTGGGACG CCAGACTCTG GCAACACCTG CAATGGGTGA CATTCAGGTA GGAATGATGG
3121ACAAAAAGGG ACAGCTGGAG GTAGAAATCA TCCGGGCCCG TGGCCTTGTT GTAAAACCAG
3181GTTCCAAGAC ACTGCCAGCA CCGTATGTAA AAGTGTATCT ATTAGATAAC GGAGTCTGCA
3241TAGCCAAAAA GAAAACAAAA GTGGCAAGAA AAACGCTGGA ACCCCTTTAC CAGCAGCTAT
3301TATCTTTCGA AGAGAGTCCA CAAGGAAAAG TTTTACAGAT CATCGTCTGG GGAGATTATG
3361GCCGCATGGA TCACAAATCT TTTATGGGAG TGGCCCAGAT ACTTTTAGAT GAACTAGAGC
3421TATCCAATAT GGTGATCGGA TGGTTCAAAC TTTTCCCACC TTCCTCCCTA GTAGATCCAA
3481CCTTGGCCCC TCTGACAAGA AGAGCTTCCC AATCATCTCT GGAAAGTTCA ACTGGACCTT
3541CTTACTCTCG TTCATACCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
3601tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)