Construct: ORF ccsbBroadEn_07476

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015264.1_s300c1, BRDN0000394904
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UTP14C (9724)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9724 UTP14C UTP14C small subunit proces... NM_021645.6 99.9% 99.8% 49G>C
2 human 10813 UTP14A UTP14A small subunit proces... NM_006649.4 93.7% 89.5% (many diffs)
3 human 10813 UTP14A UTP14A small subunit proces... NM_001166221.1 87.4% 83.8% (many diffs)
4 human 10813 UTP14A UTP14A small subunit proces... XM_017029237.1 74.6% 69.4% (many diffs)
5 human 10813 UTP14A UTP14A small subunit proces... XM_017029238.2 54.7% 52.6% (many diffs)
6 human 440138 ALG11 ALG11 alpha-1,2-mannosyltra... NR_036571.3 42.9% 1_551del;600G>C;2850_5347del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2367
ORF length:
2298
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAATGTGAAC CAGGTTGCAG AGAATCTGGC TTTGAGCCAC CAGGAACAAC
121TAGTGGATTT GCCAAAAAAC TACCCCTTGA GTGAAAATGA AGATGAGGGG GACAGTGATG
181GAGAGAGAAA GCATCAAAAG CTTCTGGAAG CAATCATTTC CCTTGATGGA AAGAATAGGC
241GGAAATTGGC TGAGAGGTCT GAGGCTAGTC TGAAAGTGTC AGAGTTCAGT GTCAGTTCTG
301AAGGATCAGG AGAAAAGCTG GGCCTTGCAG ATCTGCTTGA GCCCGTTAAA ACTTCATCTT
361CTTTGGCCAC TGTAAAAAAG CAACTGAATA GAGTCAAATC AAAGAAGGTG GTGGAGTTAC
421CTCTTAACAA AGAAAAAATT GAACAGATCC ACAGAGAAGT AGCATTCAGT AAAACCTCAC
481AGGTCCTCTC CAAATGGGAC CCTATCATCC TGAAGAACCA GCAGGCAGAG CAGCTGGTTT
541TTCCCCTGGG GAAGGAGCAG CCAGCCATTG CTCCCATTGA ACATGCGCTC AGTGGCTGGA
601AGGCAAGAAC TCCCCTGGAG CAGGAAATTT TTAACCTCCT CCATAAGAAC AAGCAGCCAG
661TGACAGATCC TTTACTGACT CCCATGGAAA AGGCCTCTCT CCAAGCCATG AGCCTGGAAG
721AGGCAAAGAT GCACCGAGCA GAGCTTCAGA GGGCTCGGGC TCTGCAGTCC TACTATGAGG
781CCAAGGCTCG AAAAGAGAAG AAAATCAAAA GTAAAAAGTA TCACAAAGTC GTGAAGAAAG
841GAAAGGCCAA GAAAGCCTTA AAAGAGTTTG AGCAGCTACA GAAGGTTAAT CCAACTGTGG
901CACTGGAAGA AATGGAAAAA ATTGAAAATG CCAGAATGAT GGAAAGAATG AGCCTTAAGC
961ACCAAAACAG TGGGAAATGG GCCAAGTCAA AGGCAATTAT GGCCAAATAT GACCTGGAGG
1021CTCGCCAAGC TATGCAGGAA CAGTTGGCCA AGAACAAAGA ACTGACACAG AAACTCCAGG
1081TAGCCTCTGA GAGTGAGGAA GAGGAGGGAG GCACAGAAGT GGAAGAACTC CTTGTCCCTC
1141ATGTAGCGAA TGAAGTGCAG ATGAATGTGG ACGGACCGAA TCCCTGGATG TTCAGGAGCT
1201GCACCAGTGA CACCAAAGAG GCTGCAACAC AGGAGGACCC TGAGCAAGTG CCAGAGCTTG
1261CAGCTCATGA GGTTTCTGCA AGTGAGGCAG AAGAAAGACC AGTGGCAGAG GAAGAAATTT
1321TGTTGAGAGA ATTTGAGGAA AGGCAATCCC TTAGAAAAAG ATCTGAGCTC AACCAGGATG
1381CTGAGCCAGC AAGCAGTCAA GAAACAAAAG ATTCTAGCAG CCAGGAGGTG CTGTCCGAAT
1441TGAGGGCACT ATCTCAGAAA TTGAAGGAAA AACATCAGTC CAGGAAGCAA AAAGCAAGTT
1501CAGAGGGGAC TGTTCCCCAG GTCCAGAGAG AGGAACCTGC CCCAGAAGAA GCGGAACCCC
1561TATTGCTACA GAGGTCAGAG AGAGTACAAA CTCTGGAAGA GCTAGAAGAG CTGGGAAAAG
1621AAGATTGTTT TCAAAATAAG GAGCTTCCCA GACCTGTGTT AGAAGGACAG CAGTCAGAGA
1681GGACCCCAAA TAATCGGCCT GATGCCCCTA AGGAGAAGAA AGAGAAGGAG CAACTGATCA
1741ACCTACAGAA CTTCCTGACC ACACAGTCTC CTTCCGTGAG GTCTTTGGCA GTTCCCACAA
1801TAATAGAGGA GCTGGAAGAT GAAGAGGAGA GAGACCAAAG GCAGATGATA AAGGAAGCTT
1861TTGCTGGGGA TGATGTCATC AGAGATTTCT TGAAAGAGAA GAGGGAAGCT GTGGAGGCGA
1921GTAAGCCAAA GGACGTGGAC CTGACACTAC CTGGCTGGGG CGAGTGGGGT GGTGTGGGCC
1981TAAAGCCCAG TGCCAAGAAA AGACGCCAGT TTCTCATTAA AGCCCCTGAG GGTCCTCCAA
2041GAAAAGATAA GAATTTGCCA AATGTGATTA TCAGTGAGAA GCGCAACATC CACGCAGCAG
2101CTCATCAGGT ACAAGTGCTT CCATATCCAT TTACCCACCA TCGGCAATTT GAAAGGACCA
2161TCCAGACCCC TATAGGATCC ACATGGAACA CCCAGAGGGC TTTCCAAAAG CTGACTACTC
2221CCAAGGTCGT CACCAAGCCA GGCCATATCA TTAAGCCCAT AAAAGCAGAG GATGTGGGCT
2281ACCAGTCTTC CTCAAGGTCA GACCTGCCTG TCATACAGAG GAATCCAAAA CGAATCACCA
2341CACGTCACAA TAAAGAAGAA AAACTGTTGC CAACTTTCTT GTACAAAGTt ggcattataa
2401gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)