Construct: ORF ccsbBroadEn_07659

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011525.1_s300c1, BRDN0000391054
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GAS2L1 (10634)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10634 GAS2L1 growth arrest specific 2 li... NM_001362985.2 99.9% 99.8% 1631C>T
2 human 10634 GAS2L1 growth arrest specific 2 li... NM_006478.5 99.9% 99.8% 1631C>T
3 human 10634 GAS2L1 growth arrest specific 2 li... NM_152236.3 99.9% 99.8% 1631C>T
4 human 10634 GAS2L1 growth arrest specific 2 li... XM_011529825.1 99.9% 99.8% 1631C>T
5 human 10634 GAS2L1 growth arrest specific 2 li... XM_017028533.1 99.9% 99.8% 1631C>T
6 human 10634 GAS2L1 growth arrest specific 2 li... NM_001278730.2 66.6% 66.6% 1006_1007ins681
7 mouse 78926 Gas2l1 growth arrest-specific 2 li... NM_001190408.1 82.6% 86.4% (many diffs)
8 mouse 78926 Gas2l1 growth arrest-specific 2 li... NM_144560.3 82.6% 86.4% (many diffs)
9 mouse 78926 Gas2l1 growth arrest-specific 2 li... NM_030228.3 41.7% 43.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2109
ORF length:
2043
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC AGACCCAGTG GCGGGCATCG CGGGCTCGGC GGCCAAGAGC GTGCGGCCAT
121TTCGCTCCAG TGAGGCCTAC GTGGAGGCCA TGAAGGAGGA CCTGGCCGAG TGGCTCAATG
181CCTTGTACGG CCTGGGTCTC CCGGGTGGTG GCGATGGCTT CCTGACAGGG CTGGCCACGG
241GCACGACCCT GTGCCAACAT GCCAACGCCG TGACCGAGGC TGCCCGTGCA TTGGCAGCCG
301CCCGCCCGGC CCGAGGTGTG GCCTTCCAGG CGCACAGTGT AGTGCCTGGC TCCTTCATGG
361CGCGCGACAA CGTGGCCACC TTCATCGGCT GGTGCCGCGT GGAGCTGGGT GTGCCGGAGG
421TGCTCATGTT TGAGACTGAG GACCTGGTGC TGCGCAAGAA CGAGAAGAGC GTGGTGCTGT
481GCCTGCTGGA GGTGGCGCGG CGTGGGGCAC GCCTGGGCCT GCTGGCCCCA CGCCTCGTGC
541AGTTTGAGCA GGAGATTGAG CGGGAGCTGC GTGCTGCACC CCCAGCCCCC AACGCCCCTG
601CCGCTGGGGA GGACACCACT GAAACCGCCC CCGCACCAGG GACTCCTGCC CGCGGCCCCC
661GCATGACACC CAGCGACCTG CGCAACCTCG ACGAGCTGGT GAGGGAGATT CTGGGCCGCT
721GCACCTGCCC TGACCAGTTT CCCATGATCA AGGTCTCAGA GGGGAAGTAC CGTGTGGGGG
781ACTCGAGCCT GCTCATCTTT GTGCGGGTGC TGAGGAGCCA CGTGATGGTG CGAGTGGGTG
841GTGGCTGGGA CACGCTGGAG CATTACCTGG ACAAGCACGA CCCGTGCCGC TGCTCCTCCA
901CTGCTCATCG CCCACCCCAG CCGAGGGTCT GCACCTTTTC TCCACAGAGG GTGTCGCCCA
961CCACCAGTCC CCGCCCTGCT AGCCCAGTCC CTGGGAGTGA GCGCCGGGGC TCCCGGCCTG
1021AGATGACTCC CGTTAGCTTA CGAAGCACAA AGGAGGGGCC CGAGACCCCA CCCAGGCCCC
1081GGGATCAGCT GCCCCCCCAT CCCCGCTCCC GCCGCTACTC CGGGGACAGT GACTCCTCAG
1141CCTCCTCCGC CCAGAGCGGC CCCCTTGGTA CCCGCAGTGA TGACACAGGC ACTGGCCCCC
1201GGAGGGAGCG ACCCAGCCGG CGGCTGACCA CAGGCACCCC GGCCTCTCCG AGACGGCCTC
1261CTGCCCTGCG CAGCCAGTCC CGAGACCGGC TGGATCGCGG CCGGCCCCGG GGGGCCCCAG
1321GAGGCAGGGG AGCCCAGCTG TCGGTCCCCA GCCCTGCCCG GCGGGCCCGG AGCCAGAGCC
1381GCGAGGAGCA GGCTGTGCTG CTTGTGCGCA GGGATCGAGA CGGGCAGCAC TCATGGGTGC
1441CAAGGGGCAG GGGCAGTGGG GGCTCGGGCA GGAGCACCCC CCAGACTCCC CGTGCCCGCA
1501GCCCTGCAGC ACCCCGGCTT TCCCGGGTCT CCAGCCCCAG TCCAGAGTTG GGCACCACAC
1561CGGCCAGCAT CTTCCGCACA CCCCTGCAGC TCGACCCGCA GCAGGAGCAG CAGCTGTTCC
1621GGCGCCTGGA AGAGGAGTTC CTGGCCAATG CCCGGGCCCT TGAGGCTGTT GCTAGCGTGA
1681CCCCCACTGG ACCAGTCCCT GACCCAGCTC GGGCCCCCGA CCCTCCAGCT CCTGACTCTG
1741CCTATTGTTC CTCCAGTTCC TCCTCTTCGT CCCTCAGCGT CCTGGGTGGC AAATGTGGCC
1801AACCTGGGGA CTCTGGCCGG ACGGCCAATG GGCTGCCTGG GCCCCGAAGC CAAGCCCTTT
1861CCAGCTCCTC CGATGAAGGC AGCCCCTGCC CTGGCATGGG GGGGCCACTA GATGCACCTG
1921GGAGCCCCCT GGCTTGCACT GAACCCTCGA GGACCTGGGC ACGGGGTCGG ATGGACACAC
1981AGCCAGACCG TAAACCCTCA CGTATCCCCA CGCCTCGGGG CCCCCGCCGC CCCTCCGGAC
2041CCGCAGAGCT GGGGACATGG CATGCCCTGC ACTCAGTCAC CCCGAGGGCT GAGCCAGATT
2101CCTGGATGTG CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
2161tttgttgcaa cgaac

Download FASTA (ORF) (Full)