Construct: ORF ccsbBroadEn_07689

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014568.1_s300c1, BRDN0000457254
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TUBGCP2 (10844)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10844 TUBGCP2 tubulin gamma complex assoc... NM_006659.3 99.8% 99.8% 1941C>T;2097T>C;2677C>A
2 human 10844 TUBGCP2 tubulin gamma complex assoc... NM_001256617.1 96.8% 96.8% (many diffs)
3 human 10844 TUBGCP2 tubulin gamma complex assoc... NM_001256618.1 85.4% 85.4% (many diffs)
4 human 10844 TUBGCP2 tubulin gamma complex assoc... NR_046330.1 57.9% (many diffs)
5 mouse 74237 Tubgcp2 tubulin, gamma complex asso... NM_001286007.1 85.9% 90.8% (many diffs)
6 mouse 74237 Tubgcp2 tubulin, gamma complex asso... NM_133755.2 85.9% 90.8% (many diffs)
7 mouse 74237 Tubgcp2 tubulin, gamma complex asso... NM_001286009.1 75% 79.1% (many diffs)
8 mouse 74237 Tubgcp2 tubulin, gamma complex asso... XM_011249861.2 60.2% 63.5% (many diffs)
9 mouse 74237 Tubgcp2 tubulin, gamma complex asso... NM_001286011.1 57.9% 61.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2775
ORF length:
2706
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAGTGAATTT CGGATTCACC ATGACGTCAA TGAACTGCTT AGCCTGCTGC
121GTGTCCACGG AGGAGATGGG GCTGAGGTCT ACATTGACCT GCTTCAAAAG AACAGGACCC
181CGTACGTCAC TACCACTGTC TCTGCTCACA GTGCCAAGGT TAAAATTGCA GAGTTTTCTC
241GTACTCCAGA AGACTTTCTA AAGAAATATG ATGAACTGAA ATCTAAAAAT ACAAGGAACC
301TTGACCCGCT GGTGTACCTG TTGTCAAAGC TCACGGAAGA CAAAGAGACT CTGCAGTACT
361TACAACAGAA TGCAAAAGAA AGAGCTGAGC TTGCAGCCGC TGCTGTGGGC AGCAGTACCA
421CCAGCATCAA CGTCCCTGCC GCGGCCTCCA AGATCTCCAT GCAGGAGCTT GAGGAACTGA
481GGAAGCAGCT TGGCAGCGTG GCCACAGGCT CCACGCTGCA GCAGTCTCTG GAACTTAAAA
541GAAAGATGCT TCGAGACAAG CAGAACAAAA AAAATTCAGG CCAGCACCTC CCCATCTTCC
601CAGCATGGGT GTATGAGAGA CCTGCCCTGA TCGGGGATTT CCTGATTGGT GCTGGCATCA
661GCACAGACAC CGCTTTGCCG ATAGGCACGT TGCCCCTGGC CTCGCAGGAG TCGGCCGTGG
721TGGAGGACCT GCTGTACGTG CTGGTGGGCG TGGACGGGAG GTACGTCAGT GCTCAGCCCC
781TGGCTGGGAG GCAGAGCCGG ACCTTCCTCG TGGACCCCAA CCTGGACCTG TCCATCAGGG
841AGCTGGTGCA CAGGATCCTC CCAGTGGCCG CCAGCTACTC CGCTGTGACC AGGTTCATTG
901AAGAGAAGTC TTCCTTCGAG TACGGGCAGG TGAACCACGC CCTGGCGGCC GCCATGCGCA
961CCCTGGTGAA GGAGCACCTG ATTCTGGTGT CACAGCTGGA GCAGCTGCAC AGGCAGGGCC
1021TCCTTTCGCT GCAGAAGCTC TGGTTCTACA TCCAGCCAGC CATGCGCACC ATGGACATCC
1081TGGCCTCCCT CGCCACCTCG GTGGACAAAG GCGAATGTCT TGGGGGGTCC ACGCTGAGCC
1141TGCTCCACGA CAGGAGCTTC AGCTACACAG GGGACAGCCA GGCGCAGGAG CTATGCCTGT
1201ACCTAACCAA GGCGGCCAGT GCTCCCTACT TCGAGGTTCT GGAGAAGTGG ATCTACAGGG
1261GCATCATCCA CGACCCATAC AGTGAGTTTA TGGTCGAGGA GCACGAGCTG CGGAAGGAGA
1321GGATCCAGGA GGATTACAAC GACAAGTACT GGGACCAGCG GTACACCATC GTCCAGCAGC
1381AGATCCCGTC CTTCCTGCAG AAAATGGCGG ACAAGATCCT CAGCACAGGA AAATATCTAA
1441ATGTGGTCAG AGAGTGTGGC CATGACGTCA CCTGCCCGGT GGCTAAAGAG ATCATCTACA
1501CGTTAAAAGA GCGGGCGTAT GTGGAGCAGA TCGAGAAGGC GTTTAACTAC GCCAGCAAGG
1561TGCTGCTGGA CTTCCTGATG GAGGAGAAGG AGCTGGTGGC TCACCTCAGG TCCATCAAGC
1621GCTACTTCCT CATGGACCAG GGCGACTTCT TCGTGCACTT CATGGACCTC GCGGAGGAGG
1681AGCTCCGGAA GCCGGTGGAG GACATCACGC CCCCTCGCCT GGAAGCGCTC CTGGAGCTGG
1741CGCTGCGCAT GAGCACGGCC AACACTGACC CCTTCAAGGA CGACCTCAAG ATCGACCTGA
1801TGCCCCATGA CCTCATCACT CAGCTCTTGC GCGTCCTGGC CATCGAGACC AAGCAGGAGA
1861AGGCGATGGC GCACGCCGAC CCCACGGAGC TGGCGCTGAG CGGCCTGGAG GCCTTCTCTT
1921TCGACTACAT CGTCAAGTGG CCCCTTTCGC TCATCATCAA CAGGAAAGCC CTCACTCGCT
1981ACCAGATGCT CTTCAGGCAC ATGTTCTATT GCAAGCACGT GGAGCGGCAG CTCTGCAGCG
2041TCTGGATCAG CAACAAAACC GCCAAGCAGC ACTCGCTGCA CTCCGCCCAG TGGTTTGCTG
2101GGGCTTTCAC TCTGCGGCAG CGAATGCTCA ACTTCGTCCA GAATATTCAA TACTACATGA
2161TGTTCGAAGT GATGGAACCG ACCTGGCACA TCCTGGAGAA AAACCTGAAA TCCGCCTCCA
2221ACATTGACGA CGTCCTTGGC CACCACACAG GCTTCCTGGA CACCTGCCTG AAGGACTGCA
2281TGCTCACCAA CCCCGAGCTG CTGAAGGTCT TCTCCAAGCT CATGTCTGTG TGCGTCATGT
2341TCACCAACTG CATGCAGAAA TTTACACAGA GCATGAAATT AGATGGCGAG CTGGGCGGGC
2401AGACGCTGGA GCACAGCACC GTCCTGGGGC TGCCCGCAGG GGCCGAGGAG CGGGCCCGGA
2461AGGAGCTCGC CAGGAAGCAC CTGGCTGAGC ACGCAGACAC TGTGCAGCTG GTGTCCGGCT
2521TCGAGGCCAC CATCAACAAG TTTGACAAGA ACTTCTCAGC CCACCTGCTG GACCTCCTGG
2581CCCGGCTGAG CATCTATAGC ACCAGTGACT GTGAGCACGG CATGGCCAGC GTCATCTCCA
2641GGCTTGACTT CAATGGTTTC TACACGGAGC GCCTGGAGCG CCTGTCTGCA GAGAGGAGCC
2701AGAAGGCCAC CCCCCAAGTG CCTGTCCTGC GGGGGCCCCC GGCTACTGCA CCCAGGGTCG
2761CAGTCACCGC ACAGTTGCCA ACTTTCTTGT ACAAAGTTGG cattataaga aagcattgct
2821tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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