Construct: ORF ccsbBroadEn_07739

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011256.1_s300c1, BRDN0000395477
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WWP2 (11060)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11060 WWP2 WW domain containing E3 ubi... NM_001270454.2 99.8% 100% 1239G>A;1707T>C;2091A>G
2 human 11060 WWP2 WW domain containing E3 ubi... NM_007014.5 99.8% 100% 1239G>A;1707T>C;2091A>G
3 human 11060 WWP2 WW domain containing E3 ubi... XM_011522823.2 99.8% 100% 1239G>A;1707T>C;2091A>G
4 human 11060 WWP2 WW domain containing E3 ubi... XM_011522825.1 99.8% 100% 1239G>A;1707T>C;2091A>G
5 human 11060 WWP2 WW domain containing E3 ubi... XM_017022879.1 99.8% 100% 1239G>A;1707T>C;2091A>G
6 human 11060 WWP2 WW domain containing E3 ubi... XM_017022880.1 99.8% 100% 1239G>A;1707T>C;2091A>G
7 human 11060 WWP2 WW domain containing E3 ubi... XM_017022881.1 99.8% 100% 1239G>A;1707T>C;2091A>G
8 human 11060 WWP2 WW domain containing E3 ubi... NM_001270453.1 86.5% 86.6% (many diffs)
9 human 11060 WWP2 WW domain containing E3 ubi... XM_011522826.3 86.5% 86.6% (many diffs)
10 human 11060 WWP2 WW domain containing E3 ubi... NM_199424.3 49.4% 49.5% 0_1ins1317;390T>C;774A>G
11 human 11060 WWP2 WW domain containing E3 ubi... NM_001270455.2 38.4% 38.5% 1005_1005delGins1606
12 mouse 66894 Wwp2 WW domain containing E3 ubi... NM_025830.3 89.8% 95.9% (many diffs)
13 mouse 66894 Wwp2 WW domain containing E3 ubi... XM_006531299.3 89.8% 95.9% (many diffs)
14 mouse 66894 Wwp2 WW domain containing E3 ubi... XR_001778461.1 74.8% (many diffs)
15 mouse 66894 Wwp2 WW domain containing E3 ubi... XM_006531301.1 45.1% 48.7% (many diffs)
16 mouse 66894 Wwp2 WW domain containing E3 ubi... XM_017312941.1 33.7% 35.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2676
ORF length:
2610
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC ATCTGCCAGC TCTAGCCGGG CAGGAGTGGC CCTGCCTTTT GAGAAGTCTC
121AGCTCACTTT GAAAGTGGTG TCCGCAAAGC CCAAGGTGCA TAATCGTCAA CCTCGAATTA
181ACTCCTACGT GGAGGTGGCG GTGGATGGAC TCCCCAGTGA GACCAAGAAG ACTGGGAAGC
241GCATTGGGAG CTCTGAGCTT CTCTGGAATG AGATCATCAT TTTGAATGTC ACGGCACAGA
301GTCATTTAGA TTTAAAGGTC TGGAGCTGCC ATACCTTGAG AAATGAACTG CTAGGCACCG
361CATCTGTCAA CCTCTCCAAC GTCTTGAAGA ACAATGGGGG CAAAATGGAG AACATGCAGC
421TGACCCTGAA CCTGCAGACG GAGAACAAAG GCAGCGTTGT CTCAGGCGGA GAGCTGACAA
481TTTTCCTGGA CGGGCCAACT GTTGATCTGG GAAATGTGCC TAATGGCAGT GCCCTGACAG
541ATGGATCACA GCTGCCTTCG AGAGACTCCA GTGGAACAGC AGTAGCTCCA GAGAACCGGC
601ACCAGCCCCC CAGCACAAAC TGCTTTGGTG GAAGATCCCG GACGCACAGA CATTCGGGTG
661CTTCAGCCAG AACAACCCCA GCAACCGGCG AGCAAAGCCC CGGTGCTCGG AGCCGGCACC
721GCCAGCCCGT CAAGAACTCA GGCCACAGTG GCTTGGCCAA TGGCACAGTG AATGATGAAC
781CCACAACAGC CACTGATCCC GAAGAACCTT CCGTTGTTGG TGTGACGTCC CCACCTGCTG
841CACCCTTGAG TGTGACCCCG AATCCCAACA CGACTTCTCT CCCTGCCCCA GCCACACCGG
901CTGAAGGAGA GGAACCCAGC ACTTCGGGTA CACAGCAGCT CCCAGCGGCT GCCCAGGCCC
961CCGACGCTCT GCCTGCTGGA TGGGAACAGC GAGAGCTGCC CAACGGACGT GTCTATTATG
1021TTGACCACAA TACCAAGACC ACCACCTGGG AGCGGCCCCT TCCTCCAGGC TGGGAAAAAC
1081GCACAGATCC CCGAGGCAGG TTTTACTATG TGGATCACAA TACTCGGACC ACCACCTGGC
1141AGCGTCCGAC CGCGGAGTAC GTGCGCAACT ATGAGCAGTG GCAGTCGCAG CGGAATCAGC
1201TCCAGGGGGC CATGCAGCAC TTCAGCCAAA GATTCCTCTA CCAGTCTTCG AGTGCTTCGA
1261CTGACCATGA TCCCCTGGGC CCCCTCCCTC CTGGCTGGGA GAAAAGACAG GACAATGGAC
1321GGGTGTATTA CGTGAACCAT AACACTCGCA CGACCCAGTG GGAGGATCCC CGGACCCAGG
1381GGATGATCCA GGAACCAGCT CTGCCCCCAG GATGGGAGAT GAAATACACC AGCGAGGGGG
1441TGCGATACTT TGTGGACCAC AATACCCGCA CCACCACCTT TAAGGATCCT CGCCCGGGGT
1501TTGAGTCGGG GACGAAGCAA GGTTCCCCTG GTGCTTATGA CCGCAGTTTT CGGTGGAAGT
1561ATCACCAGTT CCGTTTCCTC TGCCATTCAA ATGCCCTACC TAGCCACGTG AAGATCAGCG
1621TTTCCAGGCA GACGCTTTTC GAAGATTCCT TCCAACAGAT CATGAACATG AAACCCTATG
1681ACCTGCGCCG CCGGCTCTAC ATCATCATGC GTGGCGAGGA GGGCCTGGAC TATGGGGGCA
1741TCGCCAGAGA GTGGTTTTTC CTCCTGTCTC ACGAGGTGCT CAACCCTATG TATTGTTTAT
1801TTGAATATGC CGGAAAGAAC AATTACTGCC TGCAGATCAA CCCCGCCTCC TCCATCAACC
1861CGGACCACCT CACCTACTTT CGCTTTATAG GCAGATTCAT CGCCATGGCG CTGTACCATG
1921GAAAGTTCAT CGACACGGGC TTCACCCTCC CTTTCTACAA GCGGATGCTC AATAAGAGAC
1981CAACCCTGAA AGACCTGGAG TCCATTGACC CTGAGTTCTA CAACTCCATT GTCTGGATCA
2041AAGAGAACAA CCTGGAAGAA TGTGGCCTGG AGCTGTACTT CATCCAGGAC ATGGAGATAC
2101TGGGCAAGGT GACGACCCAC GAGCTGAAGG AGGGCGGCGA GAGCATCCGG GTCACGGAGG
2161AGAACAAGGA AGAGTACATC ATGCTGCTGA CTGACTGGCG TTTCACCCGA GGCGTGGAAG
2221AGCAGACCAA AGCCTTCCTG GATGGCTTCA ACGAGGTGGC CCCGCTGGAG TGGCTGCGCT
2281ACTTTGACGA GAAAGAGCTG GAGCTGATGC TGTGCGGCAT GCAGGAGATA GACATGAGCG
2341ACTGGCAGAA GAGCACCATC TACCGGCACT ACACCAAGAA CAGCAAGCAG ATCCAGTGGT
2401TCTGGCAGGT GGTGAAGGAG ATGGACAACG AGAAGAGGAT CCGGCTGCTG CAGTTTGTCA
2461CCGGTACCTG CCGCCTGCCC GTCGGGGGAT TTGCCGAACT CATCGGTAGC AACGGACCAC
2521AGAAGTTTTG CATTGACAAA GTTGGCAAGG AAACCTGGCT GCCCAGAAGC CACACCTGCT
2581TCAACCGTCT GGATCTTCCA CCCTACAAGA GCTACGAACA GCTGAGAGAG AAGCTGCTGT
2641ATGCCATTGA GGAGACCGAG GGCTTTGGAC AGGAGTACCC AACTTTCTTG TACAAAGTtg
2701gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)