Construct: ORF ccsbBroadEn_07753

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017280.1_s300c1, BRDN0000386157
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KRR1 (11103)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11103 KRR1 KRR1 small subunit processo... NM_007043.7 99.7% 99.4% 741A>G;824A>G;1015A>G
2 mouse 52705 Krr1 KRR1, small subunit (SSU) p... NM_178610.4 85.4% 91.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1209
ORF length:
1143
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GTCTCCCTCG CTGGAGCGGC CAGAAAAAGG CGCTGGAAAA AGTGAATTTC
121GTAACCAGAA GCCGAAGCCG GAGAACCAAG ATGAATCAGA ACTCCTTACG GTTCCTGATG
181GTTGGAAGGA ACCAGCTTTT TCCAAAGAGG ACAATCCCAG AGGACTTTTG GAGGAGAGCA
241GTTTCGCAAC TTTGTTCCCA AAATACAGGG AAGCTTACTT GAAAGAGTGT TGGCCATTGG
301TGCAGAAAGC CTTAAATGAA CATCATGTTA ATGCAACCCT GGACCTGATC GAAGGCAGCA
361TGACTGTTTG TACTACAAAG AAGACTTTTG ATCCATATAT CATCATTAGG GCCAGAGATC
421TGATAAAACT GTTAGCAAGG AGTGTTTCAT TTGAACAGGC AGTACGAATT CTTCAGGATG
481ATGTTGCATG TGACATCATT AAAATAGGTT CTTTAGTAAG GAATAAAGAG AGATTTGTAA
541AACGAAGACA ACGGCTTATT GGTCCCAAAG GATCTACATT GAAGGCATTG GAACTCTTAA
601CTAATTGTTA CATTATGGTT CAGGGAAACA CAGTTTCAGC CATTGGACCT TTTAGTGGCT
661TAAAAGAGGT TAGAAAAGTA GTCCTTGATA CTATGAAGAA TATTCATCCA ATTTATAACA
721TTAAAAGCTT AATGATTAAG AGAGAGTTGG CAAAAGATTC TGAATTACGA TCACAAAGTT
781GGGAGAGATT TTTGCCACAG TTCAAGCACA AAAATGTGAA TAAACGCAAG GAACCAAAGA
841AAAAAACTGT TAAGAAAGAA TATACGCCAT TCCCACCACC ACAACCAGGA AGTCAGATCG
901ATAAAGAATT GGCTAGTGGT GAATACTTTT TGAAGGCAAA TCAGAAGAAG CGGCAGAAAA
961TGGAAGCAAT AAAGGCTAAA CAAGCAGAAG CCATCAGTAA GAGACAAGAG GAAAGAAACA
1021AAGCATTTAT TCCACCTAAG GAAAAACCAA TTGTGAAACC TAAGGAAGCT TCTACTGAAG
1081CTAAAATTGA TGTGGCCAGC ATCAAGGAAA AGGTTAAGAA AGCAAAGAAT AAGAAACTGG
1141GAGCTCTTAC AGCTGAAGAA ATTGCACTTA AGATGGAGGC AGATGAAAAG AAAAAGAAGA
1201AAAAAAAGTA CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
1261tttgttgcaa cgaac

Download FASTA (ORF) (Full)