Construct: ORF ccsbBroadEn_07870

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012853.1_s300c1, BRDN0000456756
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANGEL1 (23357)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23357 ANGEL1 angel homolog 1 NM_015305.4 99.9% 99.8% 1244A>G
2 human 23357 ANGEL1 angel homolog 1 NM_001370748.1 92.8% 89.1% (many diffs)
3 human 23357 ANGEL1 angel homolog 1 NM_001370747.1 92.6% 92.5% 1244A>G;1380_1538del
4 human 23357 ANGEL1 angel homolog 1 NM_001370746.1 86.3% 82.9% (many diffs)
5 mouse 68737 Angel1 angel homolog 1 NM_144524.2 89% 90.4% (many diffs)
6 mouse 68737 Angel1 angel homolog 1 XM_006516199.3 86.4% 85.6% (many diffs)
7 mouse 68737 Angel1 angel homolog 1 XM_011244169.1 85.7% 83.8% (many diffs)
8 mouse 68737 Angel1 angel homolog 1 XM_006516200.3 82.8% 84.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2076
ORF length:
2010
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAT CGCGTCGTGC TTGTGTTACC TGCTGCTGCC GGCCACGCGC CTCTTCCGCG
121CCCTCTCAGA TGCTTTCTTC ACATGTCGAA AAAATGTCCT TCTGGCGAAC AGCTCATCCC
181CCCAGGTAGA GGGCGACTTT GCCATGGCCC CTCGGGGCCC TGAGCAGGAG GAATGTGAGG
241GCCTGCTGCA GCAGTGGCGA GAAGAAGGGT TGAGCCAGGT GCTCTCAACT GCAAGTGAGG
301GGCCCCTTAT AGATAAAGGA CTAGCCCAGA GCAGCCTGGC ACTTCTGATG GATAATCCTG
361GAGAAGAGAA TGCTGCTTCA GAGGACAGGT GGTCCAGCAG GCAGCTGAGT GACCTTCGGG
421CTGCAGAGAA CCTGGATGAG CCTTTCCCTG AGATGCTAGG AGAGGAGCCA CTGCTGGAGG
481TGGAGGGGGT GGAGGGCTCC ATGTGGGCAG CTATCCCCAT GCAGTCGGAG CCCCAGTATG
541CAGACTGTGC TGCCCTCCCA GTGGGTGCCC TGGCCACAGA GCAGTGGGAA GAGGACCCAG
601CGGTGTTGGC CTGGAGCATA GCACCTGAGC CTGTGCCCCA GGAAGAGGCT TCCATCTGGC
661CCTTTGAGGG CCTGGGGCAG TTGCAGCCTC CCGCAGTGGA AATACCATAT CATGAAATTT
721TGTGGCGAGA ATGGGAGGAT TTCTCCACCC AGCCAGATGC TCAGGGCCTG AAGGCAGGAG
781ATGGCCCTCA GTTCCAGTTC ACTCTGATGT CTTATAACAT CCTGGCTCAG GACCTGATGC
841AGCAGAGCTC AGAGCTCTAT CTACATTGCC ATCCAGACAT CCTCAATTGG AACTATCGCT
901TCGTGAACCT CATGCAGGAA TTCCAGCACT GGGACCCTGA TATCCTGTGT CTCCAGGAAG
961TCCAGGAAGA TCATTACTGG GAGCAGCTGG AACCCTCTCT GCGAATGATG GGCTTTACCT
1021GTTTCTACAA GAGGAGGACT GGGTGTAAAA CCGATGGCTG TGCTGTCTGC TACAAGCCTA
1081CCAGATTCCG CCTGCTCTGT GCTAGCCCTG TGGAGTACTT CCGGCCTGGC TTGGAGCTAC
1141TTAATCGGGA TAATGTGGGC TTAGTGTTGC TACTGCAACC ACTCGTCCCA GAAGGCCTGG
1201GACAAGTCTC GGTGGCCCCG CTGTGTGTGG CAAATACCCA TATCCTTTAC AACCCACGCC
1261GGGGCGATGT CAAGCTGGCC CAGATGGCCA TTCTCCTGGC GGAAGTGGGC AAGGTGGCCA
1321GACTGTCAGA TGGCAGCCAC TGCCCCATCA TCTTGTGCGG GGACCTAAAT TCTGTCCCTG
1381ATTCACCTCT CTACAACTTC ATCAGGGATG GAGAGCTCCA GTACCATGGG ATGCCAGCCT
1441GGAAGGTATC TGGACAGGAA GACTTCTCCC ATCAGCTTTA CCAGAGGAAG CTGCAGGCCC
1501CACTGTGGCC CAGCTCCCTG GGCATCACTG ATTGCTGTCA GTATGTCACC TCCTGTCACC
1561CCAAGAGATC AGAGAGACGC AAGTATGGCC GAGACTTCCT GCTACGTTTC CGCTTCTGCA
1621GCATCGCTTG TCAGCGACCA GTAGGACTGG TCCTTATGGA AGGAGTGACA GATACTAAGC
1681CAGAGCGACC TGCGGGTTGG GCTGAGTCTG TCCTTGAGGA AGATGCATCG GAGCTTGAGC
1741CTGCCTTCTC CAGGACTGTA GGTACCATCC AGCACTGCCT CCACCTGACG TCAGTATATA
1801CCCACTTCCT GCCCCAGCGT GGCCGCCCAG AGGTCACTAC AATGCCATTG GGTCTTGGAA
1861TGACAGTAGA TTACATCTTC TTCTCAGCTG AGTCCTGTGA GAATGGGAAC AGAACTGATC
1921ACAGGCTGTA TCGAGATGGA ACTCTCAAGC TCCTGGGTCG TCTCTCCCTT CTCTCTGAAG
1981AGATACTCTG GGCTGCCAAT GGCTTACCCA ACCCCTTCTG CTCTTCAGAC CACCTCTGCC
2041TGCTAGCCAG CTTCGGGATG GAAGTCACCG CCCCATGCCC AACTTTCTTG TACAAAGTTG
2101Gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)