Construct: ORF ccsbBroadEn_07889

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018132.1_s300c1, BRDN0000392346
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
QPRT (23475)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23475 QPRT quinolinate phosphoribosylt... NM_014298.5 99.8% 99.6% 157G>A
2 human 23475 QPRT quinolinate phosphoribosylt... XM_017023101.1 78.1% 77.8% 1_246del;403G>A;829A>G
3 human 23475 QPRT quinolinate phosphoribosylt... XM_005255223.3 77.9% 77.6% (many diffs)
4 human 23475 QPRT quinolinate phosphoribosylt... NM_001318250.1 50.1% 50.1% 104_105ins444
5 human 23475 QPRT quinolinate phosphoribosylt... NM_001318249.1 47.8% 39.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
957
ORF length:
891
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA CGCTGAAGGC CTGGCGCTGC TGCTGCCGCC CGTCACCCTG GCAGCCCTGG
121TGGACAGCTG GCTCCGAGAG GACTGCCCAG GGCTCAACTA CGCAGCCTTG GTCAGCGGGG
181CAGGCCCCTC GCAGGCGGCG CTGTGGGCCA AATCCCCTGG GATACTGGCA GGGCAGCCTT
241TCTTCGATGC CATATTTACC CAACTCAACT GCCAAGTCTC CTGGTTCCTC CCCGAGGGAT
301CGAAGCTGGT GCCGGTGGCC AGAGTGGCCG AGGTCCGGGG CCCTGCCCAC TGCCTGCTGC
361TGGGGGAACG GGTGGCCCTC AACACGCTGG CCCGCTGCAG TGGCATTGCC AGTGCTGCCG
421CCGCTGCAGT GGAGGCCGCC AGGGGGGCCG GCTGGACTGG GCACGTGGCA GGCACGAGGA
481AGACCACGCC AGGCTTCCGG CTGGTGGAGA AGTATGGGCT CCTGGTGGGC GGGGCCGCCT
541CGCACCGCTA CGACCTGGGA GGGCTGGTGA TGGTGAAGGA TAACCATGTG GTGGCCGCCG
601GTGGCGTGGA GAAGGCGGTG CGGGCGGCCA GACAGGCGGC TGACTTCGCT CTGAAGGTGG
661AAGTGGAATG CAGCAGCCTG CAGGAGGCCG TGCAGGCAGC TGAGGCTGGT GCCGACCTTG
721TCCTGCTGGA CAACTTCAAG CCAGAGGAGC TGCACCCCAC GGCCACCGTG CTGAAGGCCC
781AGTTCCCGAG TGTGGCTGTG GAAGCCAGTG GGGGCATCAC CCTGGACAAC CTCCCCCAGT
841TCTGCGGGCC GCACATAGAC GTCATCTCCA TGGGGATGCT GACCCAGGCG GCCCCAGCCC
901TTGATTTCTC CCTCAAGCTG TTTGCCAAAG AGGTGGCTCC AGTGCCCAAA ATCCACTACC
961CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1021aac

Download FASTA (ORF) (Full)