Construct: ORF ccsbBroadEn_08190

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000517.1_s300c1, BRDN0000388237
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF141 (50862)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 50862 RNF141 ring finger protein 141 NM_016422.4 99.8% 100% 117T>C
2 mouse 67150 Rnf141 ring finger protein 141 NM_025999.3 92.4% 99.1% (many diffs)
3 mouse 67150 Rnf141 ring finger protein 141 XM_006508123.2 92.4% 99.1% (many diffs)
4 mouse 67150 Rnf141 ring finger protein 141 XM_006508124.2 92.4% 99.1% (many diffs)
5 mouse 67150 Rnf141 ring finger protein 141 XM_006508125.2 71.4% 77.3% (many diffs)
6 mouse 67150 Rnf141 ring finger protein 141 XR_869742.1 23.3% (many diffs)
7 mouse 67150 Rnf141 ring finger protein 141 XR_001777995.1 9.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
756
ORF length:
690
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGAATGGG ACAGCAAATT TCGGATCAGA CACAGTTGGT TATTAACAAG TTACCAGAAA
121AAGTAGCAAA ACATGTTACG TTGGTTCGAG AGAGTGGCTC CTTAACTTAT GAAGAATTTC
181TCGGGAGAGT AGCTGAGCTT AATGATGTAA CGGCTAAAGT GGCTTCTGGC CAGGAAAAAC
241ATCTTCTCTT TGAGGTACAA CCTGGGTCTG ATTCCTCTGC TTTTTGGAAA GTGGTTGTAC
301GGGTGGTCTG TACCAAGATT AACAAAAGCA GTGGCATTGT GGAGGCATCA CGGATCATGA
361ATTTATACCA GTTTATTCAA CTTTATAAAG ATATCACAAG TCAAGCAGCA GGAGTATTGG
421CACAGAGCTC CACCTCTGAA GAACCTGATG AAAACTCATC CTCTGTAACA TCTTGTCAGG
481CTAGTCTTTG GATGGGAAGG GTGAAGCAGC TGACCGATGA GGAGGAGTGT TGTATCTGTA
541TGGATGGGCG GGCTGACCTC ATCCTGCCTT GTGCTCACAG CTTTTGTCAG AAGTGTATTG
601ATAAATGGAG TGATCGACAC AGGAATTGCC CTATTTGTCG CCTACAGATG ACTGGAGCAA
661ATGAATCTTG GGTGGTATCA GATGCACCCA CTGAAGATGA TATGGCTAAC TATATTCTTA
721ACATGGCTGA TGAGGCAGGC CAGCCCCACA GGCCATGCCC AACTTTCTTG TACAAAGTtg
781gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)