Construct: ORF ccsbBroadEn_08504

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014425.1_s300c1, BRDN0000386538
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CWF19L1 (55280)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55280 CWF19L1 CWF19 like cell cycle contr... NM_018294.6 99.9% 99.8% 188C>T
2 human 55280 CWF19L1 CWF19 like cell cycle contr... NM_001303404.2 92.5% 92.3% 188C>T;1251_1252ins120
3 human 55280 CWF19L1 CWF19 like cell cycle contr... NM_001303405.2 74.5% 74.5% 0_1ins411
4 human 55280 CWF19L1 CWF19 like cell cycle contr... NM_001303406.2 74.5% 74.5% 0_1ins411
5 human 55280 CWF19L1 CWF19 like cell cycle contr... NM_001303407.2 54.4% 54.4% 0_1ins735
6 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... NM_001081077.1 87.6% 89% (many diffs)
7 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_006527364.2 64.7% 66.1% (many diffs)
8 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_006527365.2 64.7% 66.1% (many diffs)
9 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_011247357.2 64.7% 66.1% (many diffs)
10 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_011247358.2 64.7% 66.1% (many diffs)
11 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_017318296.1 64.7% 66.1% (many diffs)
12 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_017318297.1 64.7% 66.1% (many diffs)
13 mouse 72502 Cwf19l1 CWF19-like 1, cell cycle co... XM_006527367.2 47.8% 48.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1680
ORF length:
1614
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC ACAGAAACCG CTGCGCCTCT TGGCTTGTGG AGATGTTGAA GGAAAGTTTG
121ATATTTTATT CAATAGAGTT CAAGCAATTC AGAAGAAAAG TGGAAACTTT GATCTGCTGT
181TGTGTGTAGG AAATTTCTTT GGCTCCACCC AAGATGCTGA ATGGGAGGAG TATAAGACTG
241GCATCAAGAA AGTTCCTATT CAGACATATG TGCTTGGTGC TAATAACCAG GAAACAGTAA
301AATATTTCCA GGATGCTGAT GGATGTGAAT TAGCTGAAAA CATTACTTAT CTGGGTCGTA
361AAGGTATCTT CACTGGAAGC TCGGGGCTGC AGATTGTGTA CCTCAGTGGG ACAGAATCCT
421TAAATGAGCC AGTACCAGGT TATAGTTTTA GTCCCAAGGA TGTGTCTTCT CTGAGAATGA
481TGCTGTGTAC AACCTCCCAG TTTAAGGGTG TTGATATCTT GCTCACATCC CCATGGCCCA
541AGTGTGTGGG GAACTTTGGG AATTCTTCTG GAGAAGTGGA TACCAAAAAA TGTGGTTCTG
601CTTTGGTTTC CAGTCTTGCC ACGGGCTTGA AACCAAGATA CCATTTTGCT GCTTTGGAAA
661AGACCTATTA TGAGAGGCTT CCATATCGAA ACCATATCAT TCTACAGGAA AATGCACAGC
721ATGCCACCCG GTTTATAGCT CTGGCAAATG TTGGAAATCC AGAAAAGAAA AAGTATCTTT
781ACGCGTTCAG TATTGTTCCC ATGAAGCTAA TGGATGCAGC AGAACTGGTA AAACAGCCTC
841CGGATGTCAC TGAAAACCCT TACAGAAAAT CTGGGCAGGA AGCATCCATA GGAAAGCAAA
901TTCTTGCCCC TGTGGAAGAA TCAGCCTGTC AGTTTTTCTT TGATTTAAAT GAAAAGCAGG
961GAAGGAAGCG TTCATCCACA GGTAGAGATA GCAAATCTTC TCCTCATCCA AAGCAGCCTC
1021GCAAACCTCC TCAGCCTCCA GGACCCTGCT GGTTTTGCCT TGCTAGCCCT GAAGTGGAAA
1081AACATTTGGT GGTCAACATC GGCACACATT GCTACCTTGC CCTGGCCAAA GGAGGCTTAT
1141CTGATGACCA TGTCCTCATC CTGCCTATTG GACACTACCA GTCAGTGGTG GAGCTTTCAG
1201CAGAGGTGGT AGAAGAGGTG GAGAAGTATA AGGCCACTCT GAGACGGTTC TTTAAGAGTC
1261GAGGGAAATG GTGTGTTGTA TTTGAGAGAA ATTATAAGAG CCATCACCTC CAGCTACAGG
1321TCATTCCTGT CCCAATCAGC TGCTCTACTA CTGATGACAT TAAAGATGCC TTCATTACCC
1381AGGCACAGGA GCAGCAGATA GAGCTGTTGG AAATCCCAGA GCACTCTGAC ATCAAGCAGA
1441TTGCACAGCC AGGAGCAGCA TATTTTTATG TTGAACTTGA CACAGGAGAA AAGCTTTTCC
1501ACAGAATTAA AAAGAATTTT CCTTTGCAGT TTGGAAGGGA GGTCCTGGCC AGTGAAGCCA
1561TCCTTAATGT TCCTGATAAG TCTGACTGGA GGCAGTGTCA GATCAGCAAG GAAGACGAGG
1621AGACCCTGGC TCGCCGCTTC CGGAAAGACT TTGAGCCCTA TGACTTTACT CTGGATGACT
1681ACCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1741acgaac

Download FASTA (ORF) (Full)

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