Construct: ORF ccsbBroadEn_08564

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017344.1_s300c1, BRDN0000397185
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PEX26 (55670)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55670 PEX26 peroxisomal biogenesis fact... NM_001127649.3 99.8% 99.6% 676T>C
2 human 55670 PEX26 peroxisomal biogenesis fact... NM_017929.6 99.8% 99.6% 676T>C
3 human 55670 PEX26 peroxisomal biogenesis fact... NM_001199319.1 83.9% 83.9% 665_666ins147
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
981
ORF length:
915
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GAGCGATTCT TCGACCTCTG CAGCCCCCCT CAGGGGGCTC GGGGGACCCC
121TGCGCAGCAG CGAGCCGGTG CGCGCGGTCC CGGCCCGGGC GCCGGCCGTG GACCTTCTGG
181AGGAGGCGGC CGACCTCCTG GTGGTGCACC TGGACTTCCG GGCGGCGCTG GAGACCTGCG
241AGCGGGCCTG GCAGAGTCTG GCCAACCACG CCGTGGCAGA GGAACCCGCG GGCACCTCAT
301TGGAGGTGAA GTGCTCCCTG TGTGTTGTGG GGATCCAGGC CCTGGCAGAA ATGGATCGGT
361GGCAAGAAGT CCTCTCCTGG GTCCTTCAGT ATTACCAGGT CCCTGAAAAG CTACCCCCCA
421AAGTCCTGGA GCTGTGCATT CTTTTATACA GCAAAATGCA AGAGCCTGGA GCTGTGCTGG
481ATGTGGTGGG TGCCTGGCTC CAAGACCCAG CCAATCAAAA CCTTCCAGAA TATGGAGCCT
541TGGCAGAATT TCACGTGCAG CGGGTGCTGC TGCCTCTGGG CTGCTTATCG GAGGCTGAGG
601AGCTAGTGGT GGGCTCTGCA GCCTTTGGTG AGGAGCGGCG ACTGGATGTA CTTCAGGCCA
661TTCACACAGC GAGGCAGCAG CAGAAACAGG AACACTCAGG CTCTGAGGAG GCCCAGAAGC
721CAAACCTGGA AGGCTCTGTC CCCCACAAGT TCCTGTCACT ACCGATGTTG GTTCGCCAGC
781TTTGGGACTC TGCGGTGAGC CACTTCTTTT CTCTGCCCTT CAAAAAGAGT CTCCTGGCTG
841CCTTGATCCT CTGTCTCCTG GTGGTGAGAT TTGATCCAGC TTCCCCTTCC TCCCTGCACT
901TCCTCTACAA GCTGGCCCAG CTCTTCCGCT GGATCCGGAA GGCTGCATTT TCTCGCCTCT
961ACCAGCTCCG CATCCGTGAC TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1021attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)