Construct: ORF ccsbBroadEn_08590

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012100.1_s300c1, BRDN0000457455
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CACNA2D3 (55799)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55799 CACNA2D3 calcium voltage-gated chann... NM_018398.3 99.9% 100% 2265C>T
2 mouse 12294 Cacna2d3 calcium channel, voltage-de... NM_009785.1 89.9% 98% (many diffs)
3 mouse 12294 Cacna2d3 calcium channel, voltage-de... XM_006518486.4 89.5% 97.5% (many diffs)
4 mouse 12294 Cacna2d3 calcium channel, voltage-de... XM_011244938.3 87.5% 95.3% (many diffs)
5 mouse 12294 Cacna2d3 calcium channel, voltage-de... XM_030247616.1 82.1% 89.9% (many diffs)
6 mouse 12294 Cacna2d3 calcium channel, voltage-de... XR_001781093.2 46.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3342
ORF length:
3273
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCCGGGCCG GGCTCGCCGC GCCGCGCGTC CCGGGGGGCC TCGGCGCTTC
121TCGCTGCCGC GCTTCTCTAC GCCGCGCTGG GGGACGTGGT GCGCTCGGAG CAGCAGATAC
181CGCTCTCCGT GGTGAAGCTC TGGGCCTCGG CTTTTGGTGG GGAGATAAAA TCCATTGCTG
241CTAAGTACTC CGGTTCCCAG CTTCTGCAAA AGAAATACAA AGAGTATGAG AAAGACGTTG
301CCATAGAAGA AATTGATGGC CTCCAACTGG TAAAGAAGCT GGCAAAGAAC ATGGAAGAGA
361TGTTTCACAA GAAGTCTGAG GCCGTCAGGC GTCTGGTGGA GGCTGCAGAA GAAGCACACC
421TGAAACATGA ATTTGATGCA GACTTACAGT ATGAATACTT CAATGCTGTG CTGATAAATG
481AAAGGGACAA AGACGGGAAT TTTTTGGAGC TGGGAAAGGA ATTCATCTTA GCCCCAAATG
541ACCATTTTAA TAATTTGCCT GTGAACATCA GTCTAAGTGA CGTCCAAGTA CCAACGAACA
601TGTACAACAA AGACCCTGCA ATTGTCAATG GGGTTTATTG GTCTGAATCT CTAAACAAAG
661TTTTTGTAGA TAACTTTGAC CGTGACCCAT CTCTCATATG GCAGTACTTT GGAAGTGCAA
721AGGGCTTTTT TAGGCAGTAT CCGGGGATTA AATGGGAACC AGATGAGAAT GGAGTCATTG
781CCTTCGACTG CAGGAACCGA AAATGGTACA TCCAGGCAGC AACTTCTCCG AAAGACGTGG
841TCATTTTAGT TGACGTCAGT GGCAGCATGA AAGGACTCCG TCTGACTATC GCGAAGCAAA
901CAGTCTCATC CATTTTGGAT ACACTTGGGG ATGATGACTT CTTCAACATA ATTGCTTATA
961ATGAGGAGCT TCACTATGTG GAACCTTGCC TGAATGGAAC TTTGGTGCAA GCCGACAGGA
1021CAAACAAAGA GCACTTCAGG GAGCATCTGG ACAAACTTTT CGCCAAAGGA ATTGGAATGT
1081TGGATATAGC TCTGAATGAG GCCTTCAACA TTCTGAGTGA TTTCAACCAC ACGGGACAAG
1141GAAGTATCTG CAGTCAGGCC ATCATGCTCA TAACTGATGG GGCGGTGGAC ACCTATGATA
1201CAATCTTTGC AAAATACAAT TGGCCAGATC GAAAGGTTCG CATCTTCACA TACCTCATTG
1261GACGAGAGGC TGCGTTTGCA GACAATCTAA AGTGGATGGC CTGTGCCAAC AAAGGATTTT
1321TTACCCAGAT CTCCACCTTG GCTGATGTGC AGGAGAATGT CATGGAATAC CTTCACGTGC
1381TTAGCCGGCC CAAAGTCATC GACCAGGAGC ATGATGTGGT GTGGACCGAA GCTTACATTG
1441ACAGCACTCT CCCTCAGGCA CAAAAGCTGA CTGATGATCA GGGCCCCGTC CTGATGACCA
1501CTGTAGCCAT GCCTGTGTTT AGTAAGCAGA ACGAAACCAG ATCGAAGGGC ATTCTTCTGG
1561GAGTGGTTGG CACAGATGTC CCAGTGAAAG AACTTCTGAA GACCATCCCC AAATACAAGT
1621TAGGGATTCA CGGTTATGCC TTTGCAATCA CAAATAATGG ATATATCCTG ACGCATCCGG
1681AACTCAGGCT GCTGTACGAA GAAGGAAAAA AGCGAAGGAA ACCTAACTAT AGTAGCGTTG
1741ACCTCTCTGA GGTGGAGTGG GAAGACCGAG ATGACGTGTT GAGAAATGCT ATGGTGAATC
1801GAAAGACGGG GAAGTTTTCC ATGGAGGTGA AGAAGACAGT GGACAAAGGG AAACGGGTTT
1861TGGTGATGAC AAATGACTAC TATTATACAG ACATCAAGGG TACTCCTTTC AGTTTAGGTG
1921TGGCGCTTTC CAGAGGTCAT GGGAAATATT TCTTCCGAGG GAATGTAACC ATCGAAGAAG
1981GCCTGCATGA CTTAGAACAT CCCGATGTGT CCTTGGCAGA TGAATGGTCC TACTGCAACA
2041CTGACCTACA CCCTGAGCAC CGCCATCTGT CTCAGTTAGA AGCGATTAAG CTCTACCTAA
2101AAGGCAAAGA ACCTCTGCTC CAGTGTGATA AAGAATTGAT CCAAGAAGTC CTTTTTGACG
2161CGGTGGTGAG TGCCCCCATT GAAGCGTATT GGACCAGCCT GGCCCTCAAC AAATCTGAAA
2221ATTCTGACAA GGGCGTGGAG GTTGCCTTCC TCGGCACTCG CACGGGCCTC TCCAGAATCA
2281ACCTGTTTGT CGGGGCTGAG CAGCTCACCA ATCAGGACTT CCTGAAAGCT GGTGACAAGG
2341AGAACATTTT TAACGCAGAC CATTTCCCTC TCTGGTACCG AAGAGCCGCT GAGCAGATTC
2401CAGGGAGCTT CGTCTACTCG ATCCCATTCA GCACTGGACC AGTCAATAAA AGCAATGTGG
2461TGACAGCAAG TACATCCATC CAGCTCCTGG ATGAACGGAA ATCTCCTGTG GTGGCAGCTG
2521TAGGCATTCA GATGAAACTT GAATTTTTCC AAAGGAAGTT CTGGACTGCC AGCAGACAGT
2581GTGCTTCCCT GGATGGCAAA TGCTCCATCA GCTGTGATGA TGAGACTGTG AATTGTTACC
2641TCATAGACAA TAATGGATTT ATTTTGGTGT CTGAAGACTA CACACAGACT GGAGACTTTT
2701TTGGTGAGAT CGAGGGAGCT GTGATGAACA AATTGCTAAC AATGGGCTCC TTTAAAAGAA
2761TTACCCTTTA TGACTACCAA GCCATGTGTA GAGCCAACAA GGAAAGCAGC GATGGCGCCC
2821ATGGCCTCCT GGATCCTTAT AATGCCTTCC TCTCTGCAGT AAAATGGATC ATGACAGAAC
2881TTGTCTTGTT CCTGGTGGAA TTTAACCTCT GCAGTTGGTG GCACTCCGAT ATGACAGCTA
2941AAGCCCAGAA ATTGAAACAG ACCCTGGAGC CTTGTGATAC TGAATATCCA GCATTCGTCT
3001CTGAGCGCAC CATCAAGGAG ACTACAGGGA ATATTGCTTG TGAAGACTGC TCCAAGTCCT
3061TTGTCATCCA GCAAATCCCA AGCAGCAACC TGTTCATGGT GGTGGTGGAC AGCAGCTGCC
3121TCTGTGAATC TGTGGCCCCC ATCACCATGG CACCCATTGA AATCAGGTAT AATGAATCCC
3181TTAAGTGTGA ACGTCTAAAG GCCCAGAAGA TCAGAAGGCG CCCAGAATCT TGTCATGGCT
3241TCCATCCTGA GGAGAATGCA AGGGAGTGTG GGGGTGCGCC GAGTCTCCAA GCCCAGACAG
3301TCCTCCTTCT GCTCCCTCTG CTTTTGATGC TCTTCTCAAG GTTGCCAACT TTCTTGTACA
3361AAGTTGGcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.