Construct: ORF ccsbBroadEn_08593

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002890.1_s300c1, BRDN0000456342
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF130 (55819)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55819 RNF130 ring finger protein 130 NM_018434.6 99.7% 99.7% 45C>A;108G>A;772G>T
2 human 55819 RNF130 ring finger protein 130 XM_011534593.3 93.7% 89.8% (many diffs)
3 human 55819 RNF130 ring finger protein 130 NM_001280801.2 91.4% 91.1% (many diffs)
4 human 55819 RNF130 ring finger protein 130 XM_024446129.1 89.1% 86.8% (many diffs)
5 mouse 59044 Rnf130 ring finger protein 130 NM_021540.4 92.9% 97.8% (many diffs)
6 mouse 59044 Rnf130 ring finger protein 130 NM_001290750.1 85.4% 87.7% (many diffs)
7 mouse 59044 Rnf130 ring finger protein 130 NM_001290749.1 84.7% 89.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1326
ORF length:
1257
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAGCTGCGCG GGGCGGGCGG GCCCTGCCCG GCTCGCCGCG CTAGCCCTGC
121TGACCTGCAG CCTGTGGCCG GCACGGGCAG ACAACGCGAG CCAGGAGTAC TACACAGCGC
181TCATCAACGT GACGGTGCAG GAGCCCGGCC GCGGCGCCCC GCTCACGTTT CGCATCGACC
241GCGGGCGCTA CGGGCTTGAC TCCCCCAAGG CCGAGGTCCG CGGCCAGGTG CTGGCGCCGC
301TGCCCCTCCA CGGAGTTGCT GATCATCTGG GCTGTGATCC ACAAACCCGG TTCTTTGTCC
361CTCCTAATAT CAAACAGTGG ATTGCCTTGC TGCAGAGGGG AAACTGCACG TTTAAAGAGA
421AAATATCACG GGCCGCTTTC CACAATGCAG TTGCTGTAGT CATCTACAAT AATAAATCCA
481AAGAGGAGCC AGTTACCATG ACTCATCCAG GCACTGGAGA TATTATTGCT GTCATGATAA
541CAGAATTGAG GGGTAAGGAT ATTTTGAGTT ATCTGGAGAA AAACATCTCT GTACAAATGA
601CAATAGCTGT TGGAACTCGA ATGCCACCGA AGAACTTCAG CCGTGGCTCT CTAGTCTTCG
661TGTCAATATC CTTTATTGTT TTGATGATTA TTTCTTCAGC ATGGCTCATA TTCTACTTCA
721TTCAGAAGAT CAGGTACACA AATGCACGCG ACAGGAACCA GCGTCGTCTC GGAGATGCAG
781CCAAGAAAGC CATCAGTAAA TTGACAACCA GGACAGTAAA GAAGGGTGAC AAGGAAACTT
841ACCCAGACTT TGATCATTGT GCAGTCTGCA TAGAGAGCTA TAAGCAGAAT GATGTCGTCC
901GAATTCTCCC CTGCAAGCAT GTTTTCCACA AATCCTGCGT GGATCCCTGG CTTAGTGAAC
961ATTGTACCTG TCCTATGTGC AAACTTAATA TATTGAAGGC CCTGGGAATT GTGCCGAATT
1021TGCCATGTAC TGATAACGTA GCATTCGATA TGGAAAGGCT CACCAGAACC CAAGCTGTTA
1081ACCGAAGATC AGCCCTCGGC GACCTCGCCG GCGACAACTC CCTTGGCCTT GAGCCACTTC
1141GAACTTCGGG GATCTCACCT CTTCCTCAGG ATGGGGAGCT CACTCCGAGA ACAGGAGAAA
1201TCAACATTGC AGTAACAAAA GAATGGTTTA TTATTGCCAG TTTTGGCCTC CTCAGTGCCC
1261TCACACTCTG CTACATGATC ATCAGAGCCA CAGCTAGCTT GAATGCTAAT GAGGTAGAAT
1321GGTTTTTGCC AACTTTCTTG TACAAAGTTG Gcattataag aaagcattgc ttatcaattt
1381gttgcaacga ac

Download FASTA (ORF) (Full)