Construct: ORF ccsbBroadEn_08651

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013894.1_s300c1, BRDN0000457268
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FSTL5 (56884)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56884 FSTL5 follistatin like 5 NM_020116.5 99.9% 99.7% 1699A>T;1891C>A
2 human 56884 FSTL5 follistatin like 5 NM_001128427.2 99.8% 99.6% 124_125insAGC;1696A>T;1888C>A
3 human 56884 FSTL5 follistatin like 5 XM_011532126.1 98.8% 98.5% 1312_1313ins27;1672A>T;1864C>A
4 human 56884 FSTL5 follistatin like 5 NM_001128428.2 98.7% 98.4% (many diffs)
5 mouse 213262 Fstl5 follistatin-like 5 NM_001253719.1 87.3% 91% (many diffs)
6 mouse 213262 Fstl5 follistatin-like 5 NM_178673.4 87.3% 91% (many diffs)
7 mouse 213262 Fstl5 follistatin-like 5 XM_017319517.1 87.1% 90.9% (many diffs)
8 mouse 213262 Fstl5 follistatin-like 5 XM_006501262.1 86.2% 89.8% (many diffs)
9 mouse 213262 Fstl5 follistatin-like 5 XM_006501263.1 86.1% 89.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2610
ORF length:
2541
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTTTAAGTGC TGGTCAGTTG TCTTGGTTCT CGGATTCATT TTTCTGGAGT
121CGGAAGGAAG GCCAACCAAA GAAGGAGGAT ATGGCCTTAA ATCCTATCAG CCTCTAATGA
181GATTGCGACA TAAGCAGGAA AAAAATCAAG AAAGTTCAAG AGTCAAAGGA TTTATGATTC
241AGGATGGCCC TTTTGGATCT TGTGAAAATA AGTACTGTGG TTTGGGAAGA CACTGTGTTA
301CCAGCAGAGA GACAGGGCAA GCAGAATGTG CCTGTATGGA CCTTTGCAAA CGTCACTACA
361AACCTGTGTG TGGATCTGAC GGAGAATTCT ATGAAAACCA CTGTGAAGTG CACAGAGCTG
421CTTGCCTGAA AAAACAAAAG ATTACCATTG TTCACAATGA AGACTGCTTC TTTAAAGGAG
481ATAAGTGCAA GACTACTGAA TACAGCAAGA TGAAAAATAT GCTATTAGAT TTACAAAATC
541AAAAATATAT TATGCAAGAA AATGAAAATC CTAATGGCGA CGACATATCT CGGAAGAAGC
601TATTGGTGGA TCAAATGTTT AAATATTTTG ATGCAGACAG TAATGGACTT GTAGATATTA
661ATGAACTAAC TCAGGTGATA AAACAGGAAG AACTTGGCAA GGATCTCTTT GATTGTACTT
721TGTATGTTCT ATTGAAATAT GATGATTTTA ATGCTGACAA GCACCTGGCT CTTGAAGAAT
781TTTATAGAGC ATTCCAAGTG ATCCAGTTGA GTCTGCCAGA AGATCAGAAA CTAAGCATCA
841CTGCAGCAAC TGTGGGACAA AGTGCTGTTC TGAGCTGTGC CATTCAAGGA ACCCTGAGAC
901CTCCCATTAT CTGGAAAAGG AACAATATTA TTCTAAATAA TTTAGATTTG GAAGACATCA
961ATGACTTTGG AGATGATGGG TCCTTGTATA TTACTAAGGT TACCACAACT CACGTTGGCA
1021ATTACACCTG CTATGCAGAT GGCTATGAAC AAGTCTATCA GACTCACATC TTCCAAGTGA
1081ATGTTCCTCC AGTCATCCGG GTGTATCCAG AGAGTCAGGC TAGAGAGCCT GGGGTAACTG
1141CCAGTCTTAG GTGCCATGCA GAGGGCATAC CAAAGCCTCA GCTTGGCTGG TTGAAGAATG
1201GAATTGATAT TACACCAAAG CTTTCCAAAC AACTCACGCT TCAAGCAAAT GGCAGTGAGG
1261TTCACATAAG CAATGTGCGC TATGAAGATA CTGGAGCATA CACTTGTATC GCAAAGAATG
1321AAGCAGGAGT GGATGAAGAC ATCTCTTCTC TTTTTGTGGA AGACTCTGCT AGAAAGACCC
1381TAGCTAACAT ATTATGGAGA GAAGAAGGTC TGGGAATTGG GAACATGTTC TATGTTTTTT
1441ATGAAGATGG AATCAAAGTG ATACAACCCA TAGAATGTGA ATTTCAGAGG CACATTAAGC
1501CTAGTGAAAA GCTCCTTGGA TTTCAGGATG AAGTCTGTCC CAAAGCTGAG GGAGATGAAG
1561TTCAGAGGTG TGTGTGGGCA TCAGCTGTTA ATGTCAAAGA CAAGTTCATT TATGTTGCAC
1621AGCCAACTTT GGACAGAGTC CTTATTGTTG ATGTGCAGTC CCAAAAAGTT GTTCAGGCAG
1681TGAGCACAGA CCCTGTCCCA GTTAAATTAC ACTATGACAA ATCACATGAT CAGGTCTGGG
1741TGCTAAGCTG GGGTACCTTG GAGAAGTCAT CACCAACACT ACAGGTAATT ACCCTGGCCA
1801GTGGGAATGT GCCTCACCAC ACGATCCACA CCCAACCAGT GGGAAAGCAA TTTGACAGAG
1861TGGATGATTT TTTCATTCCC ACCACAACAC TCATTATCAC CCATATGAGG TTTGGATTTA
1921TTCTTCATAA AGATGAAGCT GCACTACAAA AAATTGATAT TGAAACCATG TCATACATCA
1981AGACAATTAA CTTGAAGGAC TATAAGTGCG TTCCTCAGTC ATTGGCATAT ACACACTTGG
2041GAGGCTACTA CTTCATTGGC TGCAAACCTG ACAGCACCGG AGCAGTTTCC CCACAGGTCA
2101TGGTGGACGG TGTAACTGAC TCAGTCATTG GGTTCAATAG TGATGTGACG GGCACTCCAT
2161ATGTCTCTCC AGATGGCCAC TACCTTGTCA GCATTAATGA TGTGAAAGGT CTTGTAAGGG
2221TTCAGTACAT TACCATCAGA GGAGAAATAC AGGAGGCTTT TGATATTTAC ACAAATCTGC
2281ACATATCTGA TCTGGCATTT CAACCATCCT TTACTGAAGC CCACCAATAT AACATCTACG
2341GTAGTTCAAG CACACAAACT GATGTGCTCT TTGTGGAGCT CTCTTCTGGG AAGGTCAAGA
2401TGATAAAGAG TCTCAAGGAA CCACTCAAGG CAGAAGAATG GCCTTGGAAC CGGAAAAACA
2461GGCAAATCCA GGACAGTGGC TTGTTTGGTC AATACCTGAT GACACCTTCC AAGGACTCTC
2521TCTTCATCCT AGATGGACGA CTCAATAAAT TAAACTGTGA GATCACTGAA GTTGAAAAAG
2581GAAATACAGT CATTTGGGTT GGAGATGCCT TGCCAACTTT CTTTTACAAA GTTGGcatta
2641taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)