Construct: ORF ccsbBroadEn_08752

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006846.1_s300c1, BRDN0000396849
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LRRN1 (57633)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57633 LRRN1 leucine rich repeat neuronal 1 NM_001324188.2 99.8% 99.8% 255A>G;791A>G;1551T>C
2 human 57633 LRRN1 leucine rich repeat neuronal 1 NM_001324189.2 99.8% 99.8% 255A>G;791A>G;1551T>C
3 human 57633 LRRN1 leucine rich repeat neuronal 1 NM_020873.7 99.8% 99.8% 255A>G;791A>G;1551T>C
4 mouse 16979 Lrrn1 leucine rich repeat protein... NM_008516.4 87.4% 95.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2214
ORF length:
2148
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TAGGATGAGC TTTGTTATAG CAGCTTGCCA ATTGGTGCTG GGCCTACTAA
121TGACTTCATT AACCGAGTCT TCCATACAGA ATAGTGAGTG TCCACAACTT TGCGTATGTG
181AAATTCGTCC CTGGTTTACC CCACAGTCAA CTTACAGAGA AGCCACCACT GTTGATTGCA
241ATGACCTCCG CTTAACAAGG ATTCCCAGTA ACCTCTCTAG TGACACACAA GTGCTTCTCT
301TACAGAGCAA TAACATCGCG AAGACTGTGG ATGAGCTGCA GCAGCTTTTC AACTTGACTG
361AACTAGATTT CTCCCAAAAC AACTTTACTA ACATTAAGGA GGTCGGGCTG GCAAACCTAA
421CCCAGCTCAC AACGCTGCAT TTGGAGGAAA ATCAGATTAC CGAGATGACT GATTACTGTC
481TACAAGACCT CAGCAACCTT CAAGAACTCT ACATCAACCA CAACCAAATT AGCACTATTT
541CTGCTCATGC TTTTGCAGGC TTAAAAAATC TATTAAGGCT CCACCTGAAC TCCAACAAAT
601TGAAAGTTAT TGATAGTCGC TGGTTTGATT CTACACCCAA CCTGGAAATT CTCATGATCG
661GAGAAAACCC TGTGATTGGA ATTCTGGATA TGAACTTCAA ACCCCTCGCA AATTTGAGAA
721GCTTAGTTTT GGCAGGAATG TATCTCACTG ATATTCCTGG AAATGCTTTG GTGGGTCTGG
781ATAGCCTTGA GAGCCTGTCT TTTTATGATA ACAAACTGGT TAAAGTCCCT CAACTTGCCC
841TGCAAAAAGT TCCAAGTTTG AAATTCTTAG ACCTCAACAA AAACCCCATT CACAAAATCC
901AAGAAGGGGA CTTCAAAAAT ATGCTTCGGT TAAAAGAACT GGGAATCAAC AATATGGGCG
961AGCTCGTTTC TGTCGACCGC TATGCCCTGG ATAACTTGCC TGAACTCACA AAGCTGGAAG
1021CCACCAATAA CCCTAAACTC TCTTACATCC ACCGCTTGGC TTTCCGAAGT GTCCCTGCTC
1081TGGAAAGCTT GATGCTGAAC AACAATGCCT TGAATGCCAT TTACCAAAAG ACAGTCGAAT
1141CCCTCCCCAA TCTGCGTGAG ATCAGTATCC ATAGCAATCC CCTCAGGTGT GACTGTGTGA
1201TCCACTGGAT TAACTCCAAC AAAACCAACA TCCGCTTCAT GGAGCCCCTG TCCATGTTCT
1261GTGCCATGCC GCCCGAATAT AAAGGGCACC AGGTGAAGGA AGTTTTAATC CAGGATTCGA
1321GTGAACAGTG CCTCCCAATG ATATCTCACG ACAGCTTCCC AAATCGTTTA AACGTGGATA
1381TCGGCACGAC GGTTTTCCTA GACTGTCGAG CCATGGCTGA GCCAGAACCT GAAATTTACT
1441GGGTCACTCC CATTGGAAAT AAGATAACTG TGGAAACCCT TTCAGATAAA TACAAGCTAA
1501GTAGCGAAGG TACCTTGGAA ATATCTAACA TACAAATTGA AGACTCAGGA AGATACACAT
1561GTGTTGCCCA GAATGTCCAA GGGGCAGACA CTCGGGTGGC AACAATTAAG GTTAACGGGA
1621CCCTTCTGGA TGGTACCCAG GTGCTAAAAA TATACGTCAA GCAGACAGAA TCCCATTCCA
1681TCTTAGTGTC CTGGAAAGTT AATTCCAATG TCATGACGTC AAACTTAAAA TGGTCGTCTG
1741CCACCATGAA GATTGATAAC CCTCACATAA CATATACTGC CAGGGTCCCA GTCGATGTCC
1801ATGAATACAA CCTAACGCAT CTGCAGCCTT CCACAGATTA TGAAGTGTGT CTCACAGTGT
1861CCAATATTCA TCAGCAGACT CAAAAGTCAT GCGTAAATGT CACAACCAAA AATGCCGCCT
1921TCGCAGTGGA CATCTCTGAT CAAGAAACCA GTACAGCCCT TGCTGCAGTA ATGGGGTCTA
1981TGTTTGCCGT CATTAGCCTT GCGTCCATTG CTGTGTACTT TGCCAAAAGA TTTAAGAGAA
2041AAAACTACCA CCACTCATTA AAAAAGTATA TGCAAAAAAC CTCTTCAATC CCACTAAATG
2101AGCTGTACCC ACCACTCATT AACCTCTGGG AAGGTGACAG CGAGAAAGAC AAAGATGGTT
2161CTGCAGACAC CAAGCCAACC CAGGTCGACA CATCCAGAAG CTATTACATG TGGTACCCAA
2221CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)