Construct: ORF ccsbBroadEn_08787

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004912.1_s300c1, BRDN0000391737
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL12 (59349)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 59349 KLHL12 kelch like family member 12 NM_021633.4 100% 100%
2 human 59349 KLHL12 kelch like family member 12 NM_001303051.2 93.7% 93.7% 1_114del
3 human 59349 KLHL12 kelch like family member 12 XM_011509835.2 91.1% 91.1% 1_165del
4 human 59349 KLHL12 kelch like family member 12 XM_017001995.2 82.3% 81.8% (many diffs)
5 human 59349 KLHL12 kelch like family member 12 NM_001303109.2 82.2% 82.2% 830_831ins303
6 human 59349 KLHL12 kelch like family member 12 XM_011509836.2 75% 74.6% (many diffs)
7 human 59349 KLHL12 kelch like family member 12 XM_011509837.2 74.9% 74.9% 1_165del;995_996ins303
8 mouse 240756 Klhl12 kelch-like 12 NM_001311136.1 91.3% 99.2% (many diffs)
9 mouse 240756 Klhl12 kelch-like 12 XM_006529561.2 91.3% 99.2% (many diffs)
10 mouse 240756 Klhl12 kelch-like 12 NM_153128.3 86.7% 94.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1770
ORF length:
1704
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG AGGCATTATG GCCCCCAAAG ACATAATGAC AAATACTCAT GCTAAATCCA
121TCCTCAATTC AATGAACTCC CTCAGGAAGA GCAATACCCT CTGTGATGTG ACATTGAGAG
181TAGAGCAGAA AGACTTCCCT GCCCATCGGA TTGTGCTGGC TGCCTGTAGT GATTACTTCT
241GTGCCATGTT CACTAGTGAG CTCTCAGAGA AGGGGAAACC TTATGTTGAC ATCCAAGGTT
301TGACTGCCTC TACCATGGAA ATTTTATTGG ACTTTGTGTA CACAGAAACA GTACATGTGA
361CAGTGGAGAA TGTACAAGAA CTGCTTCCTG CAGCCTGTCT GCTTCAGTTG AAAGGTGTGA
421AACAAGCCTG CTGTGAGTTC TTAGAAAGTC AGTTGGACCC TTCTAATTGC CTGGGTATTA
481GGGATTTTGC TGAAACCCAC AATTGTGTTG ACCTGATGCA AGCAGCTGAG GTTTTTAGCC
541AGAAGCATTT TCCTGAAGTG GTACAGCATG AAGAGTTCAT TCTTCTGAGT CAAGGAGAGG
601TGGAAAAGCT AATCAAGTGC GACGAAATTC AGGTGGATTC TGAAGAGCCA GTCTTTGAGG
661CTGTCATCAA CTGGGTGAAG CATGCCAAGA AAGAGCGGGA AGAATCCTTG CCTAACCTGC
721TACAGTATGT GCGGATGCCC CTACTAACCC CCAGGTATAT CACAGATGTA ATAGATGCTG
781AGCCTTTCAT CCGCTGTAGT TTACAATGCA GGGATCTGGT TGATGAAGCA AAGAAGTTTC
841ATCTGAGGCC TGAACTTCGG AGTCAGATGC AGGGACCCAG GACAAGGGCT CGCCTAGGAG
901CCAATGAAGT GCTTTTGGTG GTTGGGGGCT TTGGAAGCCA GCAGTCTCCC ATTGATGTGG
961TAGAGAAATA TGACCCCAAG ACTCAGGAGT GGAGCTTTTT GCCAAGCATC ACTCGTAAGA
1021GACGTTATGT GGCCTCAGTG TCCCTTCATG ACCGGATCTA CGTCATTGGT GGCTATGATG
1081GCCGTTCCCG CCTTAGTTCA GTGGAATGTC TAGACTACAC AGCAGATGAG GATGGGGTCT
1141GGTATTCTGT GGCCCCTATG AATGTCCGAC GAGGTCTTGC TGGAGCCACC ACCCTGGGAG
1201ATATGATCTA TGTCTCTGGA GGCTTTGATG GAAGCAGGCG TCACACCAGT ATGGAGCGCT
1261ATGATCCAAA CATTGACCAG TGGAGCATGC TGGGAGATAT GCAGACAGCC CGGGAAGGTG
1321CCGGACTCGT AGTGGCCAGT GGAGTGATCT ACTGTCTAGG AGGATATGAC GGCTTGAATA
1381TCTTAAATTC AGTTGAGAAA TACGACCCTC ATACAGGACA TTGGACTAAT GTTACACCAA
1441TGGCCACCAA GCGTTCTGGT GCAGGAGTAG CCCTGCTGAA TGACCATATT TATGTGGTGG
1501GGGGATTTGA TGGTACAGCC CACCTTTCTT CCGTTGAAGC ATACAACATT CGCACTGATT
1561CCTGGACAAC TGTCACCAGT ATGACCACTC CACGATGCTA TGTAGGGGCC ACAGTGCTTC
1621GGGGGAGACT CTATGCAATT GCAGGATATG ATGGTAATTC CCTGCTAAGT AGCATTGAAT
1681GTTATGACCC TATCATCGAC AGCTGGGAAG TCGTGACATC CATGGGAACC CAGCGCTGTG
1741ATGCTGGTGT TTGTGTTCTC CGCGAGAAGT GCCCAACTTT CTTGTACAAA GTtggcatta
1801taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)