Construct: ORF ccsbBroadEn_08982

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008847.1_s300c1, BRDN0000388280
DNA Barcode:
None
Epitope Tag:
None
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
NAA60 (79903)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001083600.3 99.8% 100% 552C>G
2 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001083601.3 99.8% 100% 552C>G
3 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_024845.4 99.8% 100% 552C>G
4 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001317093.1 87.8% 79.6% (many diffs)
5 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001317095.2 73% 73.1% 0_1ins195;357C>G
6 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001317096.2 62.4% 40.6% (many diffs)
7 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001317094.2 55.2% 54.9% 240_241ins229;244C>A;248_249ins95
8 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001317097.2 51.2% 50.5% 335_336ins298;429_537del
9 human 79903 NAA60 N(alpha)-acetyltransferase ... NM_001317098.2 51.2% 50.5% 335_336ins298;429_537del
10 mouse 74763 Naa60 N(alpha)-acetyltransferase ... NM_029090.3 93.1% 97.1% (many diffs)
11 mouse 74763 Naa60 N(alpha)-acetyltransferase ... XM_006522679.1 93.1% 97.1% (many diffs)
12 mouse 74763 Naa60 N(alpha)-acetyltransferase ... XM_006522680.2 93.1% 97.1% (many diffs)
13 mouse 74763 Naa60 N(alpha)-acetyltransferase ... NM_001290689.1 66.9% 70.2% (many diffs)
14 mouse 74763 Naa60 N(alpha)-acetyltransferase ... XM_011246038.2 66.9% 70.2% (many diffs)
15 mouse 74763 Naa60 N(alpha)-acetyltransferase ... XM_017317155.1 52% 48.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
792
ORF length:
726
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC AGAGGTGGTG CCATCCAGCG CGCTCAGCGA GGTCAGCCTG CGCCTCCTCT
121GCCACGATGA CATAGACACT GTGAAGCACC TGTGTGGCGA CTGGTTCCCC ATCGAGTACC
181CAGACTCATG GTATCGTGAT ATCACATCCA ACAAGAAGTT CTTTTCCCTT GCTGCAACCT
241ACAGAGGTGC CATTGTGGGA ATGATAGTAG CTGAAATTAA GAACAGGACC AAAATACATA
301AAGAGGATGG AGATATTCTA GCATCCAACT TCTCTGTTGA CACACAAGTC GCGTACATCC
361TAAGTCTGGG CGTCGTGAAA GAGTTCAGGA AGCACGGCAT AGGTTCCCTC TTACTTGAAA
421GTTTAAAGGA TCACATATCA ACCACCGCCC AGGACCACTG CAAAGCCATT TACCTGCATG
481TCCTCACCAC CAACAACACA GCAATAAACT TCTATGAAAA CAGAGACTTC AAGCAGCACC
541ACTATCTCCC CTATTACTAC TCCATTCGAG GGGTCCTCAA AGATGGCTTC ACCTATGTCC
601TCTACATCAA CGGCGGGCAC CCTCCCTGGA CGATTTTGGA CTACATCCAG CACCTGGGCT
661CTGCACTAGC CAGCCTGAGC CCCTGCTCCA TTCCGCACAG AGTCTACCGC CAGGCCCACA
721GCCTGCTCTG CAGCTTCCTG CCATGGTCGG GCATCTCTTC CAAGAGTGGC ATCGAGTACA
781GCCGGACCAT GTGACCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
841caatttgttg caacgaac

Download FASTA (ORF) (Full)