Construct: ORF ccsbBroadEn_09154

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001838.1_s300c1, BRDN0000395454
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LOXL4 (84171)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84171 LOXL4 lysyl oxidase like 4 NM_032211.7 99.8% 99.7% 7T>A;843C>T;1214A>C
2 human 84171 LOXL4 lysyl oxidase like 4 XM_005270216.2 99.7% 99.6% (many diffs)
3 human 84171 LOXL4 lysyl oxidase like 4 XM_006718020.1 99.7% 99.6% (many diffs)
4 human 84171 LOXL4 lysyl oxidase like 4 XM_024448232.1 99.7% 99.6% (many diffs)
5 mouse 67573 Loxl4 lysyl oxidase-like 4 NM_053083.3 85.7% 86.5% (many diffs)
6 mouse 67573 Loxl4 lysyl oxidase-like 4 NM_001164311.1 85.5% 86.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2334
ORF length:
2268
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GAGGTCCCCA CCAGCCACCC TCTTTCTGTT CCTGCTGCTG CTAGGCCAGC
121CCCCTCCCAG CAGGCCACAG TCACTGGGCA CCACTAAGCT CCGGCTGGTG GGCCCAGAGA
181GCAAGCCAGA GGAGGGCCGC CTGGAGGTGC TGCACCAGGG CCAGTGGGGC ACCGTGTGTG
241ATGACAACTT TGCTATCCAG GAGGCCACAG TGGCTTGCCG CCAGCTGGGC TTCGAAGCTG
301CCTTGACCTG GGCCCACAGT GCCAAGTACG GCCAAGGGGA GGGACCCATC TGGCTGGACA
361ATGTGCGCTG TGTGGGCACA GAGAGCTCCT TGGACCAGTG CGGGTCTAAT GGCTGGGGAG
421TCAGTGACTG CAGTCACTCA GAAGACGTAG GGGTGATATG CCACCCCCGG CGCCATCGTG
481GCTACCTTTC TGAAACTGTC TCCAATGCCC TTGGGCCCCA GGGCCGGCGG CTGGAGGAGG
541TGCGGCTCAA GCCCATCCTT GCCAGTGCCA AGCAGCATAG CCCAGTGACC GAGGGAGCCG
601TGGAGGTGAA GTATGAGGGC CACTGGCGGC AGGTGTGTGA CCAGGGCTGG ACCATGAACA
661ACAGCAGGGT GGTGTGCGGG ATGCTGGGCT TCCCCAGCGA GGTGCCTGTC GACAGCCACT
721ACTACAGGAA AGTCTGGGAT CTGAAGATGA GGGACCCTAA GTCTAGGCTG AAGAGCCTGA
781CGAATAAGAA CTCCTTCTGG ATCCACCAGG TCACCTGCCT GGGGACAGAG CCCCACATGG
841CCAACTGCCA GGTGCAGGTG GCTCCAGCCC GGGGCAAGCT GCGGCCAGCC TGCCCAGGTG
901GCATGCATGC TGTGGTCAGC TGTGTGGCAG GGCCTCACTT CCGCCCACCG AAGACAAAGC
961CACAACGCAA AGGGTCCTGG GCAGAGGAGC CGAGGGTGCG CCTGCGCTCC GGGGCCCAGG
1021TGGGCGAGGG CCGGGTGGAA GTGCTCATGA ACCGCCAGTG GGGCACGGTC TGTGACCACA
1081GGTGGAACCT CATCTCTGCC AGTGTCGTGT GTCGTCAGCT GGGCTTTGGC TCTGCTCGGG
1141AGGCCCTCTT TGGGGCCCGG CTGGGCCAAG GGCTAGGGCC CATCCACCTG AGTGAGGTGC
1201GCTGCAGGGG ATATGAGCGG ACCCTCAGCG ACTGCCCTGC CCTGGAAGGG TCCCAGAATG
1261GTTGCCAACA TGAGAATGCT GCTGCTGTCA GGTGCAATGT CCCTAACATG GGCTTTCAGA
1321ATCAGGTGCG CTTGGCTGGT GGGCGTATCC CTGAGGAGGG GCTATTGGAG GTGCAGGTGG
1381AGGTGAACGG GGTCCCACGC TGGGGGAGCG TGTGCAGTGA AAACTGGGGG CTCACCGAAG
1441CCATGGTGGC CTGCCGACAG CTCGGCCTGG GTTTTGCCAT CCATGCCTAC AAGGAAACCT
1501GGTTCTGGTC GGGGACGCCA AGGGCCCAGG AGGTGGTGAT GAGTGGGGTG CGCTGCTCAG
1561GCACAGAGCT GGCCCTGCAG CAGTGCCAGA GGCACGGGCC GGTGCACTGC TCCCACGGTG
1621GCGGGCGCTT CCTGGCTGGA GTCTCCTGCA TGGACAGTGC ACCAGACCTG GTGATGAACG
1681CCCAGCTAGT GCAGGAGACG GCCTACTTGG AGGACCGCCC GCTCAGCCAG CTGTATTGTG
1741CCCACGAGGA GAACTGCCTC TCCAAGTCTG CGGATCACAT GGACTGGCCC TACGGATACC
1801GCCGCCTATT GCGCTTCTCC ACACAGATCT ACAATCTGGG CCGGACTGAC TTTCGTCCAA
1861AGACTGGACG CGATAGCTGG GTTTGGCACC AGTGCCACAG GCATTACCAC AGCATTGAGG
1921TCTTCACCCA CTACGACCTC CTCACTCTCA ATGGCTCCAA GGTGGCTGAG GGGCACAAGG
1981CCAGCTTCTG TCTGGAGGAC ACAAACTGCC CCACAGGACT GCAGCGGCGC TACGCATGTG
2041CCAACTTTGG AGAACAGGGA GTGACTGTAG GCTGCTGGGA CACCTACCGG CATGACATTG
2101ATTGCCAGTG GGTGGATATC ACAGATGTGG GCCCCGGGAA TTATATCTTC CAGGTGATTG
2161TGAACCCCCA CTATGAAGTG GCAGAGTCAG ATTTCTCCAA CAATATGCTG CAGTGCCGCT
2221GCAAGTATGA TGGGCACCGG GTCTGGCTGC ACAACTGCCA CACAGGGAAT TCATACCCAG
2281CCAATGCAGA ACTCTCCCTG GAGCAGGAAC AGCGTCTCAG GAACAACCTC ATCTGCCCAA
2341CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)