Construct: ORF ccsbBroadEn_09309

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013936.1_s300c1, BRDN0000388444
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CREB3L1 (90993)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 90993 CREB3L1 cAMP responsive element bin... NM_052854.4 99.9% 99.8% 1049T>C
2 human 90993 CREB3L1 cAMP responsive element bin... XM_006718380.3 68% 64.9% (many diffs)
3 mouse 26427 Creb3l1 cAMP responsive element bin... NM_011957.2 88.8% 91.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1623
ORF length:
1557
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA CGCCGTCTTG GAACCCTTCC CGGCCGACAG GCTGTTCCCC GGATCCAGCT
121TCCTGGACTT GGGGGATCTG AACGAGTCGG ACTTCCTCAA CAATGCGCAC TTTCCTGAGC
181ACCTGGACCA CTTTACGGAG AACATGGAGG ACTTCTCCAA TGACCTGTTC AGCAGCTTCT
241TTGATGACCC TGTGCTGGAT GAGAAGAGCC CTCTATTGGA CATGGAACTG GACTCCCCTA
301CGCCAGGCAT CCAGGCGGAG CACAGCTACT CCCTGAGCGG CGACTCAGCG CCCCAGAGCC
361CCCTTGTGCC CATCAAGATG GAGGACACCA CCCAAGATGC AGAGCATGGA GCATGGGCGC
421TGGGACACAA ACTGTGCTCC ATCATGGTGA AGCAGGAGCA GAGCCCGGAG CTGCCCGTGG
481ACCCTCTGGC TGCCCCCTCG GCCATGGCTG CCGCGGCCGC CATGGCCACC ACCCCGCTGC
541TGGGCCTCAG CCCCTTGTCC AGGCTGCCCA TCCCCCACCA GGCCCCGGGA GAGATGACTC
601AGCTGCCAGT GATCAAAGCA GAGCCTCTGG AGGTGAACCA GTTCCTCAAA GTGACACCGG
661AGGACCTGGT GCAGATGCCT CCGACGCCCC CCAGCAGCCA TGGCAGTGAC AGCGACGGCT
721CCCAGAGTCC CCGCTCTCTG CCCCCCTCCA GCCCTGTCAG GCCCATGGCG CGCTCCTCCA
781CGGCCATCTC CACCTCCCCA CTCCTCACTG CCCCTCACAA ATTACAGGGG ACATCAGGGC
841CACTGCTCCT GACAGAGGAG GAGAAGCGGA CCCTGATTGC TGAGGGCTAC CCCATCCCCA
901CAAAACTCCC CCTCACCAAA GCCGAGGAGA AGGCCTTGAA GAGAGTCCGG AGGAAAATCA
961AGAACAAGAT CTCAGCCCAG GAGAGCCGTC GTAAGAAGAA GGAGTATGTG GAGTGTCTAG
1021AAAAGAAGGT GGAGACATTT ACATCTGAGA ACAATGAACT GTGGAAGAAG GTGGAGACCC
1081TGGAGAATGC CAACAGGACC CTGCTCCAGC AGCCGCAGAA ACTCCAGACT CTGGTCACCA
1141ACAAGATCTC CAGACCTTAC AAGATGGCCG CCACCCAGAC TGGGACCTGC CTCATGGTGG
1201CAGCCTTGTG CTTTGTTCTG GTGCTGGGCT CCCTCGTGCC CTGCCTTCCC GAGTTCTCCT
1261CCGGCTCCCA GACTGTGAAG GAAGACCCCC TGGCCGCAGA CGGCGTCTAC ACGGCCAGCC
1321AGATGCCCTC CCGAAGCCTC CTATTCTACG ATGACGGGGC AGGCTTATGG GAAGATGGCC
1381GCAGCACCCT GCTGCCCATG GAGCCCCCAG ATGGCTGGGA AATCAACCCC GGGGGGCCGG
1441CAGAGCAGCG GCCCCGGGAC CACCTGCAGC ATGATCACCT GGACAGCACC CACGAGACCA
1501CCAAGTACCT GAGTGAGGCC TGGCCTAAAG ACGGTGGAAA CGGCACCAGC CCCGACTTCT
1561CCCACTCCAA GGAGTGGTTC CACGACAGGG ATCTGGGCCC CAACACCACC ATCAAACTCT
1621CCTACCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1681gcaacgaac

Download FASTA (ORF) (Full)

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