Construct: ORF ccsbBroadEn_09364

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006076.1_s300c1, BRDN0000456941
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTYH2 (94015)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 94015 TTYH2 tweety family member 2 NM_032646.6 99.7% 99.8% (many diffs)
2 human 94015 TTYH2 tweety family member 2 NM_001330453.2 93.6% 91.4% (many diffs)
3 human 94015 TTYH2 tweety family member 2 NM_052869.1 39.7% 39.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1671
ORF length:
1602
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCAGGCGGCG CGCGTGGACT ACATCGCTCC CTGGTGGGTC GTGTGGCTGC
121ACAGCGTCCC GCACGTCGGC CTGCGCCTGC AGCCCGTGAA CAGCACCTTC AGCCCCGGCG
181ACGAGAGTTA CCAGGAGTCG CTGCTGTTCC TGGGGCTGGT GGCCGCCGTC TGCCTGGGCC
241TGAACCTCAT CTTCCTTGTG GCTTACCTGG TCTGTGCATG CCACTGCCGG CGGGACGATG
301CGGTGCAGAC CAAGCAGCAC CACTCCTGCT GCATCACCTG GACGGCCGTG GTGGCCGGGC
361TCATCTGCTG TGCTGCGGTG GGCGTTGGTT TCTATGGAAA CAGCGAGACC AACGATGGGG
421CGTACCAGCT GATGTACTCC TTGGACGATG CCAACCACAC CTTCTCTGGG ATCGATGCTC
481TGGTTTCCGG AACTACCCAG AAGATGAAGG TGGACCTAGA GCAGCACCTG GCCCGGCTCA
541GTGAGATCTT TGCTGCCCGG GGCGATTACC TGCAGACCCT GAAGTTCATA CAGCAGATGG
601CGGGCAGCGT TGTTGTTCAG CTCTCAGGAC TGCCCGTGTG GAGGGAGGTC ACCATGGAGC
661TGACCAAGCT ATCCGACCAG ACTGGCTACG TGGAGTACTA CAGGTGGCTC TCCTACCTCC
721TGCTCTTTAT CCTGGACCTG GTCATCTGCC TCATTGCCTG CCTGGGACTG GCCAAGCGCT
781CCAAGTGTCT CCTGGCCTCG ATGCTGTGCT GTGGGGCACT GAGCCTGCTC CTCAGTTGGG
841CATCCCTGGC CGCTGATGGC TCTGCGGCAG TGGCCACCAG TGACTTCTGT GTGGCTCCTG
901ACACCTTCAT CCTGAACGTC ACGGAGGGCC AGATCAGCAC AGAGGTGACT CGCTACTACC
961TGTATTGCAG CCAGAGTGGA AGCAGCCCCT TCCAGCAGAC CCTGACCACC TTCCAGCGCG
1021CACTCACCAC CATGCAGATC CAGGTCGCGG GGCTGCTGCA GTTTGCCGTG CCCCTCTTCT
1081CCACTGCAGA GGAAGACCTG CTTGCAATCC AGCTCCTGCT GAACTCCTCA GAGTCCAGCC
1141TTCACCAGCT GACTGCCATG GTGGACTGCC GAGGGCTGCA CAAGGATTAT CTGGACGCTC
1201TTGCTGGCAT CTGCTACGAC GGCCTCCAGG GCTTGCTGTA CCTTGGCCTC TTCTCCTTCC
1261TGGCCGCCCT CGCCTTCTCC ACCATGATCT GTGCGGGGCC AAGGGCCTGG AAGCACTTCA
1321CCACCAGAAA CAGAGAATAC GATGACATTG ATGATGATGA CCCCTTTAAC CCCCAAGCCT
1381GGCGCATGGC GGCTCACAGT CCCCCGAGGG GACAGCTTCA CAGCTTCTGC AGCTACAGCA
1441GTGGCCTGGG AAGTCAGACC AGCCTGCAGC CCCCGGCCCA GACCATCTCC AACGCCCCTG
1501TCTCCGAGTA CATGAACCAA GCCATGCTCT TTGGTAGGAA CCCACGCTAC GAGAACGTGC
1561CACTAATCGG GAGAGCCTCC CCTCCGCCTA CGTACTCTCC CAGCATGAGA GCCACCTACC
1621TGTCTGTGGC GGATGAGCAC CTGAGGCACT ACGGGAATCA GTTTCCAGCC TTGCCAACTT
1681TCTTGTACAA AGTTGGcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)