Construct: ORF ccsbBroadEn_09412

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016945.1_s300c1, BRDN0000397456
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC124 (115098)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 115098 CCDC124 coiled-coil domain containi... NM_001136203.2 99.7% 99.5% 54T>G;653C>A
2 human 115098 CCDC124 coiled-coil domain containi... NM_138442.3 99.7% 99.5% 54T>G;653C>A
3 mouse 234388 Ccdc124 coiled-coil domain containi... NM_026964.3 82.1% 87.4% (many diffs)
4 mouse 234388 Ccdc124 coiled-coil domain containi... XM_006509655.3 82.1% 87.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
735
ORF length:
669
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC CAAGAAGTTC CAGGGTGAGA ACACCAAGTC GGCAGCGGCC CGGGCACGGA
121GGGCAGAGGC CAAGGCGGCC GCTGATGCCA AGAAGCAGAA GGAGCTGGAG GATGCCTACT
181GGAAGGACGA CGACAAACAC GTCATGAGGA AGGAGCAGCG CAAGGAGGAG AAGGAGAAGC
241GGCGCCTCGA CCAGCTGGAA CGTAAGAAGG AGACGCAGCG CCTACTGGAG GAGGAGGACT
301CCAAGCTCAA GGGCGGCAAG GCGCCGCGGG TGGCCACGTC CAGCAAGGTC ACCCGGGCCC
361AGATCGAGGA CACGCTGCGC CGAGACCATC AGCTCAGGGA GGCCCCGGAC ACAGCCGAGA
421AAGCCAAGAG CCATCTGGAG GTGCCGCTGG AGGAGAACGT GAACCGCCGC GTGCTGGAGG
481AGGGCAGCGT GGAGGCGCGC ACCATCGAGG ACGCCATTGC AGTGCTCAGC GTGGCGGAGG
541AGGCGGCCGA CCGGCACCCA GAAAGACGCA TGCGGGCAGC CTTCACAGCC TTTGAGGAAG
601CCCAGCTGCC GCGGCTCAAA CAAGAGAACC CCAACATGCG GCTGTCGCAG CTGAAACAGC
661TGCTCAAGAA GGAGTGGCTC CGCTCTCCTG ACAACCCCAT GAACCAGCGG GCCGTGCACT
721TCAATGCCCC CAAGTGCCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
781tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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