Construct: ORF ccsbBroadEn_09644

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005865.1_s300c1, BRDN0000397060
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
C18orf25 (147339)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 147339 C18orf25 chromosome 18 open reading ... NM_145055.5 99.8% 99.5% 6G>T;1198C>A
2 human 147339 C18orf25 chromosome 18 open reading ... XM_011525822.2 99.8% 99.5% 6G>T;1198C>A
3 human 147339 C18orf25 chromosome 18 open reading ... NM_001008239.2 84.7% 84.4% 6G>T;712_713ins183;1015C>A
4 human 147339 C18orf25 chromosome 18 open reading ... XM_017025555.1 84.7% 84.4% 6G>T;712_713ins183;1015C>A
5 mouse 212163 8030462N17Rik RIKEN cDNA 8030462N17 gene NM_178670.3 90.9% 93.5% (many diffs)
6 mouse 212163 8030462N17Rik RIKEN cDNA 8030462N17 gene XM_006526426.1 90.9% 93.5% (many diffs)
7 mouse 212163 8030462N17Rik RIKEN cDNA 8030462N17 gene XM_011247067.2 81.6% 76% (many diffs)
8 mouse 212163 8030462N17Rik RIKEN cDNA 8030462N17 gene XM_011247069.2 77.4% 80.6% (many diffs)
9 mouse 212163 8030462N17Rik RIKEN cDNA 8030462N17 gene XM_011247070.2 68.3% 63.8% (many diffs)
10 mouse 212163 8030462N17Rik RIKEN cDNA 8030462N17 gene XM_006526428.2 37.7% 37.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1278
ORF length:
1212
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA TATGGAGGAG GCAGTGGGAA AAGTTGAAGA ACTCATTGAG TCCGAAGCCC
121CACCAAAAGC ATCTGAACAA GAGACAGCCA AGGAGGAAGA TGGATCTGTA GAACTGGAAT
181CTCAAGTTCA GAAAGATGGT GTAGCGGATT CTACAGTTAT TTCTTCAATG CCCTGCTTGT
241TGATGGAACT GAGAAGGGAC TCTTCTGAGT CTCAGTTAGC ATCCACAGAG AGTGACAAGC
301CTACAACTGG CCGAGTTTAT GAGAGTGACT CCTCTAATCA CTGCATGCTT TCCCCTTCCT
361CTAGTGGTCA CCTGGCTGAT TCAGATACGT TGTCTTCCGC AGAAGAGAAT GAACCCTCTC
421AGGCAGAAAC GGCGGTAGAA GGAGACCCTT CAGGAGTGTC TGGTGCCACA GTTGGGCGCA
481AGTCTAGGCG GTCCCGATCT GAAAGTGAAA CTTCCACTAT GGCTGCCAAG AAAAACCGGC
541AATCCAGTGA TAAACAGAAT GGCCGAGTCG CCAAGGTTAA AGGTCATCGG AGCCAAAAGC
601ACAAGGAGAG GATCAGGCTA CTGAGGCAGA AACGGGAGGC TGCTGCAAGG AAGAAATATA
661ACCTGCTGCA GGACAGTAGT ACCAGTGATA GTGACCTGAC TTGTGACTCA AGCACGAGCT
721CATCAGATGA TGATGAAGAG GTTTCAGGGA GCAGCAAGAC AATCACTGCA GAGATACCAG
781ATGGACCTCC AGTTGTAGCT CATTATGATA TGTCTGACAC CAACTCTGAC CCAGAAGTGG
841TAAATGTGGA CAATTTATTG GCGGCTGCAG TAGTTCAAGA GCACAGTAAT TCTGTAGGCG
901GCCAGGACAC AGGAGCTACC TGGAGGACCA GCGGGCTTCT AGAGGAGCTG AATGCAGAGG
961CAGGTCATTT GGATCCAGGA TTCCTAGCAA GTGACAAAAC ATCTGCTGGC AATGCGCCAC
1021TCAATGAAGA AATTAACATT GCGTCTTCAG ATAGTGAAGT AGAGATTGTG GGAGTTCAGG
1081AACATGCAAG GTGTGTTCAT CCTCGAGGTG GTGTGATTCA GAGTGTTTCT TCATGGAAGC
1141ATGGCTCGGG CACGCAGTAT GTTAGCACCA GGCAAACACA GTCATGGACT GCTGTGACTC
1201CCCAGCAGAC TTGGGCTTCA CCAGCAGAAG TTGTTGACCT TACCTTGGAT GAGGATAGCA
1261GGAGTAAATA CCTACTGTAC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
1321gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.