Construct: ORF ccsbBroadEn_09649

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009171.1_s300c1, BRDN0000398330
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLC3 (147700)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 147700 KLC3 kinesin light chain 3 NM_177417.3 99.9% 99.8% 94C>A
2 human 147700 KLC3 kinesin light chain 3 XM_024451371.1 90.7% 90.6% 1_153del;247C>A
3 human 147700 KLC3 kinesin light chain 3 XM_024451370.1 77.2% 73% 94C>A;1441_1708del;1781_1956del
4 human 147700 KLC3 kinesin light chain 3 XM_024451369.1 71.6% 67.8% (many diffs)
5 mouse 232943 Klc3 kinesin light chain 3 NM_001286038.1 85.3% 89.9% (many diffs)
6 mouse 232943 Klc3 kinesin light chain 3 NM_001286039.1 85.3% 89.9% (many diffs)
7 mouse 232943 Klc3 kinesin light chain 3 NM_146182.4 85.3% 89.9% (many diffs)
8 mouse 232943 Klc3 kinesin light chain 3 XM_017322154.1 77.6% 80.8% (many diffs)
9 mouse 232943 Klc3 kinesin light chain 3 XM_017322153.1 76.9% 80.1% (many diffs)
10 mouse 232943 Klc3 kinesin light chain 3 XM_006539826.3 67.6% 71.2% (many diffs)
11 mouse 232943 Klc3 kinesin light chain 3 XM_006539823.3 62.7% 65.3% (many diffs)
12 mouse 232943 Klc3 kinesin light chain 3 XM_017322152.1 60% 60.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1581
ORF length:
1512
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTCTGTGCAG GTAGCGGCTC CTGGAAGTGC AGGGCTGGGC CCAGAGCGCC
121TGAGCCCTGA GGAGCTGGTG CGGCAGACGC GGCAAGTGGT CAAGGGGCTG GAGGCGCTGC
181GGGCAGAGCA CCATGGCCTG GCTGGGCACC TGGCGGAGGC CCTGGCGGGA CAGGGCCCGG
241CAGCCGGCTT GGAGATGCTG GAGGAAAAGC AGCAGGTGGT GAGCCACTCG CTGGAGGCCA
301TCGAGCTGGG GCTGGGCGAG GCCCAGGTGC TGCTGGCCCT GTCGGCACAT GTGGGTGCAC
361TGGAGGCAGA GAAGCAGCGG CTGCGCTCGC AGGCCCGGCG GCTGGCCCAG GAGAACGTGT
421GGCTGCGGGA GGAACTGGAG GAGACGCAGC GGCGGCTTCG GGCCAGCGAG GAGTCCGTGG
481CCCAGCTGGA GGAGGAGAAG CGCCACCTGG AGTTCCTGGG GCAGCTGCGA CAGTACGACC
541CACCGGCGGA GAGCCAGCAG TCTGAGTCCC CGCCTCGCCG AGACAGCCTG GCCTCCCTGT
601TCCCCAGCGA GGAGGAGGAG AGGAAAGGTC CTGAGGCCGC AGGAGCAGCA GCTGCTCAGC
661AGGGTGGCTA TGAGATCCCT GCCCGCCTTC GGACCCTGCA TAACCTCGTG ATCCAGTACG
721CGGGGCAGGG CCGCTATGAG GTGGCGGTGC CTCTGTGCCG CCAGGCCTTG GAGGACCTGG
781AGCGCAGCTC GGGCCACTGC CACCCTGACG TGGCCACCAT GCTCAACATC CTGGCGCTGG
841TGTACCGGGA CCAGAACAAG TACAAAGAAG CCACAGACCT TCTCCATGAT GCCCTGCAGA
901TCCGGGAGCA GACGCTGGGC CCTGAGCACC CCGCGGTGGC CGCCACGCTC AACAACTTGG
961CTGTCCTCTA TGGGAAGCGT GGGCGTTACC GGGAGGCAGA GCCCCTGTGC CAGCGCGCTT
1021TGGAGATCCG AGAGAAGGTC CTGGGTGCTG ACCACCCAGA TGTGGCCAAG CAGCTCAACA
1081ACCTGGCCCT GCTGTGCCAG AACCAGGGCA AGTTTGAGGA CGTGGAGCGG CACTATGCCC
1141GGGCCCTGAG CATCTATGAG GCACTGGGCG GGCCCCATGA CCCCAACGTG GCCAAGACCA
1201AGAACAACCT GGCCTCAGCC TACCTGAAAC AGAACAAGTA TCAACAAGCG GAAGAGCTGT
1261ACAAAGAAAT CCTCCACAAG GAGGACCTAC CCGCCCCTCT CGGTGCCCCC AACACAGGCA
1321CAGCTGGTGA CGCAGAACAG GCCCTTCGCC GCAGCAGCTC ACTCTCCAAG ATCCGTGAGT
1381CTATCAGGCG AGGAAGTGAG AAGCTGGTCT CCCGGCTCCG AGGCGAGGCG GCGGCAGGAG
1441CAGCCGGAAT GAAGAGAGCC ATGTCACTCA ACACACTGAA CGTGGATGCT CCAAGGGCTC
1501CTGGGACTCA GTTTCCCAGC TGGCACCTGG ACAAGGCCCC TCGGACCCTC AGCGCCAGCA
1561CCCAGGACCT GAGCCCCCAC TTGCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1621attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)