Construct: ORF ccsbBroadEn_09754

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015200.1_s300c1, BRDN0000457334
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KANK4 (163782)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 163782 KANK4 KN motif and ankyrin repeat... NM_181712.5 99.6% 99.6% (many diffs)
2 human 163782 KANK4 KN motif and ankyrin repeat... XM_011540843.3 99.6% 99.6% (many diffs)
3 human 163782 KANK4 KN motif and ankyrin repeat... XM_011540845.3 97.2% 97.2% (many diffs)
4 human 163782 KANK4 KN motif and ankyrin repeat... XM_017000483.2 92.9% 93% (many diffs)
5 human 163782 KANK4 KN motif and ankyrin repeat... NM_001320269.2 36.5% 36% (many diffs)
6 human 163782 KANK4 KN motif and ankyrin repeat... XM_017000484.2 36.5% 36% (many diffs)
7 human 163782 KANK4 KN motif and ankyrin repeat... XM_017000485.2 35.1% 34.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3051
ORF length:
2985
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GAAGACAGAT GCCAAAGACC AGTCCTCTCA GGGGGATGAA GAGAAAGACC
121CTCCGAAGAG CCACCCTTAT TCTGTGGAGA CCCCATATGG CTTTCATTTA GACCTGGACT
181TCCTCAAGTA TGTGGATGAC ATCGAGAAGG GAAACACTAT CAAAAGAATT CCTATCCACA
241GAAGGGCCAA GCAGGCCAAA TTTAGCACTC TGCCCCGAAA CTTCAGCCTT CCTGACAGTG
301GGGCTCGCCC CCCTGCAGCC CCGCCCCTCC AAAACTGGTC TCCCGTGGTG CCAAGGGAGG
361CATCACTTGG GACACAGGAG CAAAACCAGT CGCCGCCGCT TGGTAATGCC CCCCAGGCCT
421CAACAAGCAG GAGTGAGGTG AGCTACCACA GGAAGGCTCT GTTGGCAGAG GCCACCAGAC
481AGTTGGAAGC TGCTGAGCCA GAGGATGCCG AGCTCACTTT TGGGAGTGGA CGGCCCCAGC
541TCTTGAGAGC ATCCAGCATG CCTGCCACGC TGCTGCACAG CAGGGCTTCT GAGGAGCCAG
601GCCTGAGCCT GGGGCCCCCT GCCCCTCCTG CCCTCCCTCC CCTTCAGGGT GAAGGCAGTG
661TCTGTGATGG CACCTTTGAA CCTGCAGAAG GATTGGCAGG TTTCCACAGC TCCAGCCCAC
721GAGCATCAAC TCGGATTCCA GAGCTGGTCC AGGAGGGAGC TGAGCCTCCA GAGGGCGTGG
781TGAAGGTTCC AAATCACCTC CCTCTCCCAG GCCCTCCTTT CTCATTCCAG AATGTGCTTG
841TAGTTCTAGA GGACAAGGAA GATGAACACA ATGCCAGAGA AGCAGAGGTG TTGTTCACCC
901CTGGCTCCCC TACGCCAAGC CCGCCACCTC TGCCATCACC CATCCCTGAG AATGAGCTCC
961TCCTGGAAGA AATCGAGCTC AACATCAGCG AGATTCCACC CCCGCCACCT GTAGAGGTGG
1021ACATGAGAAG CATTGGCATC AGGGTAACTG AGGAAAGCCT GGGCCTTGCC AGGGTGGATC
1081CAGGCAGCAT CTCCAGCCTG AAACAGCAGG TCTCGGCCCT GGAGGGAGAG TTGTCTGGAA
1141GAACCGAGGA ACTGGCACAG GTCAGAACTG CTCTCCAGCA GCAGGAAGAG GAAATCAAAG
1201CTAGGGAGCA AAGAATTCGA GAGCTGGAGT TCACTGTAGC CCAACTGGAA GGACAGTTTC
1261ACCAAGAGAA CGCCAAAGAC ACTCAGGGCC AGACGGACGT GATGGTGAAC ACTGACCCTG
1321TCCATGGACT CTTGACCAGG GAGTCGTGTG ATAAGGGCAT TGAAGTCAAC CTTCTAGGCA
1381GCATGGAGTC TGAAAGCTGG GGGCACCGAG GAGAGGAGAA TGGCCTCCTA TGGGGGCCAG
1441ATGGTCATAA ACAAGGGAAT CAGAGCCCAG CAGAACGTGT GCTTCTGCCC CAGCTGTCAC
1501TGCCACAGGG ACCCGAGCAG GTCCTTACCT CCTCTGTACA TAGCTTCCTC TCCACTGAAC
1561TCAGGATTGA AGAAGCAGGC ACTGAACAGG AAGGAGGCCC TCAGGGAGGA ACCAGGGGAG
1621CAGGAGGCTT TCTGTGGGGC AGTGACAGAA AGACTCCCCC AGCAGGGAGG GAGGAGACCA
1681GTTCCAATCT CCCAGGGAAG GAGCACCCGG GAAGGCCACC AAGCTCGCCA ACGGATGCCA
1741CTATTGGGCA GTATGTGAAG AAGATCCAGG AGCTCCTGCA GGAGCAGTGG AACTGCCTGG
1801AGCATGGGTA CCCGGAGCTG GCCAGCGCCA TCAAGCAGCC AGCCTCCAAG CTCAGCAGCA
1861TCCAGAGCCA GCTGCTGAGC TCCCTCAACC TGCTGCTGTC GGCCTACTCG GCCCAGGCTC
1921ACCCACCCAA GGAGCCGCCG GCCTCCTCCT CCTCCCCGCC AGTGGAGATC TCCCCATCGA
1981CCAGCCTTAA ATCCATAATG AAAAAGAAAG ACTATGGCTT CCGTGCAGGA GGTAATGGGA
2041CCAAAAAGAA CCTTCAGTTT GTTGGGGTTA ACGGTGGGTA TGAGACCACC TCAAGTGAGG
2101AGACCAGCGG TGAGGACAGC ACCCCAGAGG ACTTGTCTGA CAGCGAGGCA GAGAAGAAGT
2161GTGACGGCCC AGATCACAAG CATGTCAAAG ATGCCCATCT CACCTGCGAG GCTGGGCAGG
2221GCATCCCTGA GGGCACCTGC CATGCTGCCC AGGAAAGTGG GCCTGGGGAA GAAGTCCCCC
2281ACTCCAAGGC CGAGAGATAT AAACCCTCAG AAGAATTTCT TAATGCATGC CGGGCACTGA
2341GCCAGCATCT GCCAGAAACT GGGACCACCA CAGACCAGCT CTTGAGGCAA AGCTTGAACA
2401CCATCAGTCA AGAGTGGTTC CGCGTCTCCA GCCGGAAGTC GTCTAGCCCT GCCGTGGTGG
2461CCTCCTACCT CCACGAGGTC CAGCCTCACT CCCCACACTT CCTGAAGCTG CTTGTCAACT
2521TGGCCGATCG CAACGGGAAC ACGGCCCTTC ACTACAGCGT GTCCCACTCC AACTTCTCCA
2581TCGCGAAGCT GCTGCTGGAG ACAGGCGTCT GCAATGTGGA CCATCAGAAC AAAGCTGGCT
2641ACACTGCCGT AATGATCACT CCCTTGGCTT CCGCAGAGAC CAATGAAGAC ATGGCTGTTG
2701TCTGGAAGCT CTTAAGAGAA GGAAATGTGA ACATTCAAGC TACTCAGGGA GGCCAGACTG
2761CGCTGATGCT GGGAGTCAGC CACGACAGGG AGGACATGGT TCAAGCGCTG CTTAGCTGCC
2821AGGCAGATGT CAATCTGCAG GACCACGATG GATCCTCGGC CCTCATGCTG GCCTGTCACC
2881ATGGCAACGT GGACCTGGTG CGGCTGCTCC TGGCACACCC AGCCTGCGAC AGCAGCCTGA
2941CTGACAAGGC TGGCCGCACA GCTTTGTCCA TCGCTCTGAA GTCACCCACC CATATGGAAA
3001TTGCTGGGCT TCTGAGAGCC CACGCGGAGC AGGGCAGGTC CCTGGGGCTG TACCCAACTT
3061TCTTGTACAA AGTTGGcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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