Construct: ORF ccsbBroadEn_09846

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001076.1_s300c1, BRDN0000390425
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC37A2 (219855)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 219855 SLC37A2 solute carrier family 37 me... NM_198277.3 99.9% 100% 1245T>C
2 human 219855 SLC37A2 solute carrier family 37 me... NM_001145290.2 98.4% 98.4% (many diffs)
3 human 219855 SLC37A2 solute carrier family 37 me... XR_001747788.1 48.8% (many diffs)
4 mouse 56857 Slc37a2 solute carrier family 37 (g... NM_001145960.1 84.3% 87.3% (many diffs)
5 mouse 56857 Slc37a2 solute carrier family 37 (g... NM_020258.4 83.3% 86.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1581
ORF length:
1515
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCG GTCCTCCCTG GCTCCGGGAG TCTGGTTCTT CCGGGCCTTC TCCAGGGACA
121GCTGGTTCCG AGGCCTCATC CTGCTGCTGA CCTTCCTAAT TTACGCCTGC TATCACATGT
181CCAGGAAGCC TATCAGTATC GTCAAGAGCC GTCTGCACCA GAACTGCTCG GAGCAGATCA
241AACCCATCAA TGATACTCAC AGTCTCAATG ACACCATGTG GTGCAGCTGG GCCCCATTTG
301ACAAGGACAA CTATAAGGAG TTACTAGGGG GCGTGGACAA CGCCTTCCTC ATCGCCTATG
361CCATCGGCAT GTTCATCAGT GGGGTTTTTG GGGAGCGGCT TCCGCTCCGT TACTACCTCT
421CAGCTGGAAT GCTGCTCAGT GGCCTTTTCA CCTCGCTCTT TGGCCTGGGA TATTTCTGGA
481ACATCCACGA GCTCTGGTAC TTTGTGGTCA TCCAGGTCTG TAATGGACTC GTCCAGACCA
541CAGGCTGGCC CTCTGTGGTG ACCTGTGTTG GCAACTGGTT CGGGAAGGGG AAGCGGGGGT
601TCATCATGGG CATCTGGAAT TCCCACACAT CTGTGGGCAA CATCCTGGGC TCCCTGATCG
661CCGGCATCTG GGTGAACGGG CAGTGGGGCC TGTCGTTCAT CGTGCCTGGC ATCATTACTG
721CCGTCATGGG CGTCATCACC TTCCTCTTCC TCATCGAACA CCCAGAAGAT GTGGACTGCG
781CCCCTCCTCA GCACCACGGT GAGCCAGCTG AGAACCAGGA CAACCCTGAG GACCCTGGGA
841ACAGTCCCTG CTCTATCAGG GAGAGCGGCC TTGAGACTGT GGCCAAATGC TCCAAGGGGC
901CATGCGAAGA GCCTGCTGCC ATCAGCTTCT TTGGGGCGCT CCGGATCCCA GGCGTGGTCG
961AGTTCTCTCT GTGTCTGCTG TTTGCCAAGC TGGTCAGTTA CACCTTCCTC TACTGGCTGC
1021CCCTCTACAT CGCCAATGTG GCTCACTTTA GTGCCAAGGA GGCTGGGGAC CTGTCTACAC
1081TCTTCGATGT TGGTGGCATC ATAGGCGGCA TCGTGGCAGG GCTCGTCTCT GACTACACCA
1141ATGGCAGGGC CACCACTTGC TGTGTCATGC TCATCTTGGC TGCCCCCATG ATGTTCCTGT
1201ACAACTACAT TGGCCAGGAC GGGATTGCCA GCTCCATAGT GATGCTGATC ATCTGTGGGG
1261GCCTGGTCAA TGGCCCATAC GCGCTCATCA CCACTGCTGT CTCTGCTGAC CTGGGGACTC
1321ACAAGAGCCT GAAGGGCAAC GCCAAAGCCC TGTCCACGGT CACGGCCATC ATTGACGGCA
1381CCGGCTCCAT AGGTGCGGCT CTGGGGCCTC TGCTGGCTGG GCTCATCTCC CCCACGGGCT
1441GGAACAATGT CTTCTACATG CTCATCTCTG CCGACGTCCT AGCCTGCTTG CTCCTTTGCC
1501GGTTAGTATA CAAAGAGATC TTGGCCTGGA AGGTGTCCCT GAGCAGAGGC AGCGGCTCTA
1561GTATGGTCCT AACCCACCAG TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1621attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)