Construct: ORF ccsbBroadEn_09958

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016133.1_s300c1, BRDN0000397694
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZADH2 (284273)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 284273 ZADH2 zinc binding alcohol dehydr... NM_175907.6 99.9% 100% 225C>T
2 human 284273 ZADH2 zinc binding alcohol dehydr... NM_001306093.1 67.3% 67.3% 0_1ins369
3 human 284273 ZADH2 zinc binding alcohol dehydr... XM_024451166.1 67.3% 67.3% 0_1ins369
4 mouse 225791 Zadh2 zinc binding alcohol dehydr... NM_146090.5 84.5% 88% (many diffs)
5 mouse 225791 Zadh2 zinc binding alcohol dehydr... XM_006526460.3 54.8% 57.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1197
ORF length:
1131
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCT GCGGCTGGTG CCCACCGGGG CCCGGGCCAT CGTGGACATG TCGTACGCCC
121GCCACTTCCT GGACTTCCAG GGCTCCGCCA TTCCCCAAGC CATGCAGAAG CTGGTGGTGA
181CCCGGCTGAG CCCCAACTTC CGCGAGGCCG TCACCCTGAG CCGGGACTGC CCGGTGCCGC
241TCCCCGGGGA CGGAGACCTC CTCGTCCGGA ACCGATTTGT TGGTGTTAAT GCATCTGACA
301TCAACTATTC AGCAGGCCGC TATGACCCCT CAGTTAAGCC TCCCTTTGAC ATAGGTTTCG
361AAGGCATTGG GGAGGTGGTG GCCCTAGGCC TCTCTGCTAG TGCCAGATAC ACAGTTGGCC
421AAGCTGTGGC TTACATGGCA CCTGGTTCTT TTGCTGAGTA CACAGTTGTG CCTGCCAGCA
481TTGCAACTCC AGTGCCCTCA GTGAAACCCG AGTATCTTAC CCTGCTGGTA AGTGGCACCA
541CCGCATACAT CAGCCTGAAA GAGCTCGGAG GACTGTCGGA AGGGAAAAAA GTTTTGGTGA
601CAGCAGCAGC TGGGGGAACG GGCCAGTTTG CCATGCAGCT TTCAAAGAAG GCAAAGTGCC
661ATGTAATTGG AACCTGCTCT TCTGATGAAA AGTCTGCTTT TCTGAAATCT CTTGGCTGTG
721ATCGTCCTAT CAACTATAAA ACTGAACCCG TAGGTACCGT CCTTAAGCAG GAGTACCCTG
781AAGGTGTCGA TGTGGTCTAT GAATCTGTTG GGGGAGCCAT GTTTGACTTG GCTGTAGACG
841CCCTGGCTAC GAAAGGGCGC TTGATAGTAA TAGGGTTTAT CTCTGGCTAC CAAACTCCTA
901CTGGCCTTTC GCCTGTGAAA GCAGGAACAT TGCCAGCCAA ACTGCTCAAG AAATCTGCCA
961GCGTACAGGG CTTCTTCCTG AACCATTACC TTTCTAAGTA TCAAGCAGCC ATGAGCCACT
1021TGCTCGAGAT GTGTGTGAGC GGAGACCTGG TTTGTGAGGT GGACCTTGGA GATCTGTCTC
1081CAGAGGGCAG GTTTACTGGC CTGGAGTCCA TATTCCGTGC TGTCAATTAT ATGTACATGG
1141GAAAAAACAC TGGAAAAATT GTAGTTGAAT TACCTCACTC TGTCAACAGT AAGCTGTACC
1201CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1261aac

Download FASTA (ORF) (Full)