Construct: ORF ccsbBroadEn_09998

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011565.1_s300c1, BRDN0000398507
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KRTAP19-4 (337971)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 337971 KRTAP19-4 keratin associated protein ... NM_181610.3 99.6% 98.8% 143A>G
2 human 337974 KRTAP19-7 keratin associated protein ... NM_181614.2 64.5% 58.6% (many diffs)
3 human 337973 KRTAP19-6 keratin associated protein ... NM_181612.3 61.1% 54.7% (many diffs)
4 human 337972 KRTAP19-5 keratin associated protein ... NM_181611.3 58.3% 53.7% (many diffs)
5 human 337970 KRTAP19-3 keratin associated protein ... NM_181609.4 56.8% 53.9% (many diffs)
6 human 337882 KRTAP19-1 keratin associated protein ... NM_181607.3 49.2% 45.9% (many diffs)
7 mouse 170654 Krtap19-4 keratin associated protein ... NM_130873.1 51.8% 48.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
321
ORF length:
252
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAGCTACTAT GGCAGCTATT ACAGAGGCCT GGGCTATGGC TGTGGAGGCT
121TTGGTGGCCT AGGCTATGGC TATGGCTGTG GATGTGGCAG CTTCCGCAGA CTGGGTTATG
181GCTGTGGCTT TGGAGGCAAC GGATATGGCT GCTGCCGCCC ATCATGCTAT GGAGGATATG
241GATTCTCAAT TCTACTGAAA TCCTACCCTG AGGACACGAT ATCAGAGGTC ATAAGAAGAT
301CATTCAATTT AACCAAATAT TTGCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
361attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)