Construct: ORF ccsbBroadEn_10450

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014923.1_s300c1, BRDN0000396698
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KEAP1 (9817)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9817 KEAP1 kelch like ECH associated p... NM_012289.4 99.9% 99.8% 1870T>A
2 human 9817 KEAP1 kelch like ECH associated p... NM_203500.2 99.9% 99.8% 1870T>A
3 human 9817 KEAP1 kelch like ECH associated p... XM_005260173.1 99.9% 99.8% 1870T>A
4 human 9817 KEAP1 kelch like ECH associated p... XM_005260174.1 99.9% 99.8% 1870T>A
5 human 9817 KEAP1 kelch like ECH associated p... XM_011528452.1 99.9% 99.8% 1870T>A
6 mouse 50868 Keap1 kelch-like ECH-associated p... NM_001110305.1 86.2% 93.9% (many diffs)
7 mouse 50868 Keap1 kelch-like ECH-associated p... NM_001110306.1 86.2% 93.9% (many diffs)
8 mouse 50868 Keap1 kelch-like ECH-associated p... NM_001110307.1 86.2% 93.9% (many diffs)
9 mouse 50868 Keap1 kelch-like ECH-associated p... NM_016679.4 86.2% 93.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1938
ORF length:
1872
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAGAG
61TTGGCATGCA GCCAGATCCC AGGCCTAGCG GGGCTGGGGC CTGCTGCCGA TTCCTGCCCC
121TGCAGTCACA GTGCCCTGAG GGGGCAGGGG ACGCGGTGAT GTACGCCTCC ACTGAGTGCA
181AGGCGGAGGT GACGCCCTCC CAGCATGGCA ACCGCACCTT CAGCTACACC CTGGAGGATC
241ATACCAAGCA GGCCTTTGGC ATCATGAACG AGCTGCGGCT CAGCCAGCAG CTGTGTGACG
301TCACACTGCA GGTCAAGTAC CAGGATGCAC CGGCCGCCCA GTTCATGGCC CACAAGGTGG
361TGCTGGCCTC ATCCAGCCCT GTCTTCAAGG CCATGTTCAC CAACGGGCTG CGGGAGCAGG
421GCATGGAGGT GGTGTCCATT GAGGGTATCC ACCCCAAGGT CATGGAGCGC CTCATTGAAT
481TCGCCTACAC GGCCTCCATC TCCATGGGCG AGAAGTGTGT CCTCCACGTC ATGAACGGTG
541CTGTCATGTA CCAGATCGAC AGCGTTGTCC GTGCCTGCAG TGACTTCCTG GTGCAGCAGC
601TGGACCCCAG CAATGCCATC GGCATCGCCA ACTTCGCTGA GCAGATTGGC TGTGTGGAGT
661TGCACCAGCG TGCCCGGGAG TACATCTACA TGCATTTTGG GGAGGTGGCC AAGCAAGAGG
721AGTTCTTCAA CCTGTCCCAC TGCCAACTGG TGACCCTCAT CAGCCGGGAC GACCTGAACG
781TGCGCTGCGA GTCCGAGGTC TTCCACGCCT GCATCAACTG GGTCAAGTAC GACTGCGAAC
841AGCGACGGTT CTACGTCCAG GCGCTGCTGC GGGCCGTGCG CTGCCACTCG TTGACGCCGA
901ACTTCCTGCA GATGCAGCTG CAGAAGTGCG AGATCCTGCA GTCCGACTCC CGCTGCAAGG
961ACTACCTGGT CAAGATCTTC GAGGAGCTCA CCCTGCACAA GCCCACGCAG GTGATGCCCT
1021GCCGGGCGCC CAAGGTGGGC CGCCTGATCT ACACCGCGGG CGGCTACTTC CGACAGTCGC
1081TCAGCTACCT GGAGGCTTAC AACCCCAGTG ACGGCACCTG GCTCCGGTTG GCGGACCTGC
1141AGGTGCCGCG GAGCGGCCTG GCCGGCTGCG TGGTGGGCGG GCTGTTGTAC GCCGTGGGCG
1201GCAGGAACAA CTCGCCCGAC GGCAACACCG ACTCCAGCGC CCTGGACTGT TACAACCCCA
1261TGACCAATCA GTGGTCGCCC TGCGCCCCCA TGAGCGTGCC CCGTAACCGC ATCGGGGTGG
1321GGGTCATCGA TGGCCACATC TATGCCGTCG GCGGCTCCCA CGGCTGCATC CACCACAACA
1381GTGTGGAGAG GTATGAGCCA GAGCGGGATG AGTGGCACTT GGTGGCCCCA ATGCTGACAC
1441GAAGGATCGG GGTGGGCGTG GCTGTCCTCA ATCGTCTCCT TTATGCCGTG GGGGGCTTTG
1501ACGGGACAAA CCGCCTTAAT TCAGCTGAGT GTTACTACCC AGAGAGGAAC GAGTGGCGAA
1561TGATCACAGC AATGAACACC ATCCGAAGCG GGGCAGGCGT CTGCGTCCTG CACAACTGTA
1621TCTATGCTGC TGGGGGCTAT GATGGTCAGG ACCAGCTGAA CAGCGTGGAG CGCTACGATG
1681TGGAAACAGA GACGTGGACT TTCGTAGCCC CCATGAAGCA CCGGCGAAGT GCCCTGGGGA
1741TCACTGTCCA CCAGGGGAGA ATCTACGTCC TTGGAGGCTA TGATGGTCAC ACGTTCCTGG
1801ACAGTGTGGA GTGTTACGAC CCAGATACAG ACACCTGGAG CGAGGTGACC CGAATGACAT
1861CGGGCCGGAG TGGGGTGGGC GTGGCTGTCA CCATGGAGCC CTGCCGGAAG CAGATTGACC
1921AGCAGAACTG TACCAGTTGC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
1981gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)