Construct: ORF ccsbBroadEn_10467

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012381.1_s300c1, BRDN0000386235
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF385D (79750)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79750 ZNF385D zinc finger protein 385D NM_024697.3 99.6% 99.7% (many diffs)
2 human 79750 ZNF385D zinc finger protein 385D XM_017007196.1 95% 95.1% (many diffs)
3 human 79750 ZNF385D zinc finger protein 385D XM_017007198.1 93.7% 93.7% (many diffs)
4 human 79750 ZNF385D zinc finger protein 385D XM_017007197.1 93.5% 93.4% (many diffs)
5 human 79750 ZNF385D zinc finger protein 385D XM_017007195.1 91.2% 90.2% (many diffs)
6 human 79750 ZNF385D zinc finger protein 385D XM_017007194.1 89.8% 90.4% (many diffs)
7 human 79750 ZNF385D zinc finger protein 385D XM_017007193.1 87.2% 87.8% (many diffs)
8 human 79750 ZNF385D zinc finger protein 385D XM_017007199.1 82.3% 81.8% (many diffs)
9 human 79750 ZNF385D zinc finger protein 385D XM_017007200.2 81.8% 81.8% (many diffs)
10 human 79750 ZNF385D zinc finger protein 385D XM_017007192.1 78.7% 77.9% (many diffs)
11 human 79750 ZNF385D zinc finger protein 385D XM_017007191.1 75.8% 75% (many diffs)
12 human 79750 ZNF385D zinc finger protein 385D XM_017007201.1 67.7% 67.8% (many diffs)
13 human 79750 ZNF385D zinc finger protein 385D XM_017007202.1 65.4% 61.4% (many diffs)
14 human 79750 ZNF385D zinc finger protein 385D XM_024453754.1 56% 54.1% (many diffs)
15 human 79750 ZNF385D zinc finger protein 385D XM_011534122.2 33.5% 29.3% (many diffs)
16 human 79750 ZNF385D zinc finger protein 385D XM_011534123.2 33.5% 29.3% (many diffs)
17 human 79750 ZNF385D zinc finger protein 385D XM_011534124.3 33.5% 29.3% (many diffs)
18 human 79750 ZNF385D zinc finger protein 385D XM_017007203.1 30.8% 28.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1251
ORF length:
1185
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG AAACATAATG TATTTTGGTG GTACATGCCA GAGTCCTGCT CTCCCGGCCC
121TTGTCCGTCC ACCAGCCCCT CCTTTGCAAC CATCGCTGGA TATTAAACCA TTTCTTCCCT
181TTCCTCTTGA CACTGCAGCT GCAGTCAACC TCTTCCCCAA TTTCAATGCG ATGGACCCGA
241TTCAGAAAGC TGTAATAAAC CATACATTCG GGGTTCCTCT TCCCCACCGA AGAAAGCAAA
301TCATATCATG CAACATTTGC CAGTTGAGAT TTAATTCTGA TAGCCAGGCT GCGGCCCACT
361ACAAAGGCAC GAAACATGCC AAGAAGCTCA AAGCACTGGA AGCCATGAAA AATAAGCAGA
421AATCTGTAAC TGCCAAGGAC AGCGCAAAGA CTACCTTCAC CTCCATCACT ACCAATACCA
481TCAATACCAG CTCTGACAAA ACAGACGGTA CTGCAGGGAC ACCAGCAATA TCAACGACGA
541CAACTGTGGA AATCCGCAAA AGCAGTGTTA TGACAACTGA GATCACCTCT AAAGTGGAAA
601AAAGCCCAAC GACAGCCACT GGCAATAGCT CATGTCCTTC TACTGAGACC GAGGAAGAAA
661AGGCAAAACG GCTTCTTTAC TGTTCGCTAT GCAAGGTTGC TGTCAACTCT GCCTCGCAGC
721TGGAGGCGCA CAACAGTGGT ACTAAGCACA AAACCATGTT AGAAGCCCGG AATGGAAGTG
781GCACTATCAA AGCCTTTCCT AGGGCAGGAG TGAAAGGCAA AGGACCTGTT AATAAAGGAA
841ACACAGGCCT CCAAAATAAA ACATTTCACT GTGAAATCTG TGATGTGCAC GTCAACTCGG
901AAACGCAACT TAAACAGCAC ATTAGCAGTA GAAGGCACAA AGACAGAGCT GCTGGGAAGC
961CCCCGAAACC TAAATACAGT CCTTACAACA AACTACAGAA GACAGCACAT CCACTGGGGG
1021TAAAATTAGT ATTTTCAAAA GAACCTTCAA AGCCATTGGC TCCACGAATT CTACCAAACC
1081CTCTAGCAGC TGCAGCAGCC GCAGCAGCAG TGGCAGTGAG TTCCCCCTTC AGTCTTCGAA
1141CTGCTCCAGC AGCAACACTG TTCCAGACTT CTGCGCTTCC TCCGGCACTC CTGCGGCCAG
1201CTCCCGGACC CATTCGGACC GCCCACACTC CTGTGCTGTT TGCTCCTACT ACCCAACTTT
1261CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)