Construct: ORF ccsbBroadEn_10718

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003921.1_s300c1, BRDN0000389259
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ENTPD3 (956)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 956 ENTPD3 ectonucleoside triphosphate... NM_001291961.2 99.9% 99.7% 70A>G
2 human 956 ENTPD3 ectonucleoside triphosphate... NM_001248.4 85.3% 85% 70A>G;1354_1358delGTGGG;1362_1587del
3 human 956 ENTPD3 ectonucleoside triphosphate... NM_001291960.2 85.3% 85% 70A>G;1354_1358delGTGGG;1362_1587del
4 human 956 ENTPD3 ectonucleoside triphosphate... XM_011534266.3 61.7% 61.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1422
ORF length:
1356
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTT CACTGTGCTG ACCCGCCAAC CATGTGAGCA AGCAGGCCTC AAGGCCCTCT
121ACCGAACTCC AACCGTCATT GCCTTGGTGG TCTTGCTTGT GAGTATTGTG GTACTTGTGA
181GTATCACTGT CATCCAGATC CACAAGCAAG AGGTCCTCCC TCCAGGACTG AAGTATGGTA
241TTGTGCTGGA TGCCGGGTCT TCAAGAACCA CAGTCTACGT GTATCAATGG CCAGCAGAAA
301AAGAGAATAA TACCGGAGTG GTCAGTCAAA CCTTCAAATG TAGTGTGAAA GGCTCTGGAA
361TCTCCAGCTA TGGAAATAAC CCCCAAGATG TCCCCAGAGC CTTTGAGGAG TGTATGCAAA
421AAGTCAAGGG GCAGGTTCCA TCCCACCTCC ACGGATCCAC CCCCATTCAC CTGGGAGCCA
481CGGCTGGGAT GCGCTTGCTG AGGTTGCAAA ATGAAACAGC AGCTAATGAA GTCCTTGAAA
541GCATCCAAAG CTACTTCAAG TCCCAGCCCT TTGACTTTAG GGGTGCTCAA ATCATTTCTG
601GGCAAGAAGA AGGGGTATAT GGATGGATTA CAGCCAACTA TTTAATGGGA AATTTCCTGG
661AGAAGAACCT GTGGCACATG TGGGTGCACC CGCATGGAGT GGAAACCACG GGTGCCCTGG
721ACTTAGGTGG TGCCTCCACC CAAATATCCT TCGTGGCAGG AGAGAAGATG GATCTGAACA
781CCAGCGACAT CATGCAGGTG TCCCTGTATG GCTACGTATA CACGCTCTAC ACACACAGCT
841TCCAGTGCTA TGGCCGGAAT GAGGCTGAGA AGAAGTTTCT GGCAATGCTC CTGCAGAATT
901CTCCTACCAA AAACCATCTC ACCAATCCCT GTTACCCTCG GGATTATAGC ATCAGCTTCA
961CCATGGGCCA TGTATTTGAT AGCCTGTGCA CTGTGGACCA GAGGCCAGAA AGTTATAACC
1021CCAATGATGT CATCACTTTT GAAGGAACTG GGGACCCATC TCTGTGTAAG GAGAAGGTGG
1081CTTCCATATT TGACTTCAAA GCTTGCCATG ATCAAGAAAC CTGTTCTTTT GATGGGGTTT
1141ATCAGCCAAA GATTAAAGGG CCATTTGTGG CTTTTGCAGG ATTCTACTAC ACAGCCAGTG
1201CTTTAAATCT TTCAGGTAGC TTTTCCCTGG ACACCTTCAA CTCCAGCACC TGGAATTTCT
1261GCTCACAGAA TTGGAGTCAG CTCCCACTGC TGCTCCCCAA ATTTGATGAG GTATATGCCC
1321GCTCTTACTG CTTCTCAGCC AACTACATCT ACCACTTGTT TGTGAACGGT TACAAATTCA
1381CAGAGGAGAC TTGGCCCCAA ATACACTTTG AAAAAGAAGA ATACCCAACT TTCTTGTACA
1441AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)