Construct: ORF ccsbBroadEn_11392

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005330.1_s300c1, BRDN0000393268
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ENTPD4 (9583)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9583 ENTPD4 ectonucleoside triphosphate... NM_001128930.2 91.3% 85.2% (many diffs)
2 human 9583 ENTPD4 ectonucleoside triphosphate... NM_004901.5 90.1% 84.1% (many diffs)
3 mouse 100862375 Entpd4b ectonucleoside triphosphate... XM_003688929.4 80.1% 81% (many diffs)
4 mouse 67464 Entpd4 ectonucleoside triphosphate... XM_006519453.2 80.1% 81% (many diffs)
5 mouse 67464 Entpd4 ectonucleoside triphosphate... NM_026174.3 79% 80% (many diffs)
6 mouse 100862375 Entpd4b ectonucleoside triphosphate... XM_003688928.3 79% 80% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1779
ORF length:
1713
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GAGGATTGGC ATCTCCTGTC TTTTTCCTGC TTCTTGGCAT TTTAGCATAT
121CTCCAGTAGG GTGTCCTCGA ATTCTGAATA CCAATTTACG CCAAATTATG GTCATTAGTG
181TCCTGGCTGC TGCTGTTTCA CTTTTATATT TTTCTGTTGT CATAATCCGA AATAAGTATG
241GGCGACTAAC CAGAGACAAG AAATTTCAAA GGTACCTGGC ACGAGTTACC GACATTGAAG
301CTACAGACAC CAATAACCCC AATGTGAACT ATGGGATCGT GGTGGACTGT GGTAGCAGTG
361GGTCTCGAGT ATTTGTTTAC TGCTGGCCAA GGCATAATGG CAATCCACAT GATCTGTTGG
421ATATCAGGCA AATGAGGGAT AAAAACCGAA AGCCAGTGGT CATGAAGATA AAACCGGGCA
481TTTCAGAATT TGCTACCTCT CCAGAGAAAG TCAGTGATTA CATTTCTCCA CTTTTGAACT
541TTGCTGCAGA GCATGTGCCA CGGGCAAAAC ACAAAGAGAC ACCTCTCTAC ATTCTCTGCA
601CGGCTGGAAT GAGAATCCTC CCCGAAAGCC AGCAGAAAGC TATTCTGGAA GACCTTCTGA
661CCGATATCCC CGTGCACTTT GACTTTCTGT TTTCTGACTC TCATGCAGAA GTAATTTCTG
721GGAAACAAGA AGGTGTGTAT GCTTGGATTG GCATTAATTT TGTCCTTGGA CGATTTGAGC
781ATATTGAAGA TGATGATGAG GCCGTTGTGG AAGTTAACAT TCCTGGAAGT GAAAGCAGCG
841AAGCCATTGT CCGTAAAAGG ACAGCGGGCA TTCTCGACAT GGGCGGCGTG TCGACTCAGA
901TAGCGTACGA AGTCCCCAAA ACTGAAGAAG TAGCTAAAAA CTTGTTAGCT GAATTTAACT
961TGGGATGTGA TGTTCACCAA ACTGAGCATG TGTATCGAGT CTATGTGGCC ACGTTTCTTG
1021GGTTTGGTGG CAATGCTGCT CGACAGAGAT ACGAAGACAG AATATTTGCC AACACCATTC
1081AAAAGAACAG GCTCCTGGGT AAACAGACTG GTCTGACTCC TGATATGCCG TACTTGGACC
1141CCTGCCTACC CCTAGACATT AAAGATGAAA TCCAGCAAAA TGGACAAACC ATATACCTAC
1201GAGGGACTGG AGACTTTGAC CTGTGTCGAG AGACTATCCA GCCTTTCATG AATAAAACAA
1261ACGAGACCCA GACTTCCCTC AATGGGGTCT ACCAGCCCCC AATTCACTTC CAGAACAGTG
1321AATTCTATGG CTTCTCCGAA TTCTACTACT GCACCGAGGA TGTGTTACGA ATGGGGGGAG
1381ACTACAATGC TGCTAAATTT ACTAAAGCTG CAAAGGATTA TTGTGCAACA AAGTGGTCCA
1441TTTTGCGGGA ACGCTTTGAC CGAGGACTGT ACGCCTCTCA TGCTGACCTC CACAGGCTTA
1501AGTATCAGTG CTTCAAATCG GCCTGGATGT TTGAGGTGTT TCATAGGGGC TTTTCGTTTC
1561CTGTCAACTA TAAAAGCTTA AAGACTGCCT TGCAAGTTTA CGACAAGGAG GTTCAGTGGA
1621CCCTTGGAGC CATCCTCTAC AGGACCCGCT TTCTACCATT AAGGAAAATA GGGATGCTGA
1681TAATACCTTG CTCAGGGGGT TGTCCAAAGC TGTGTTGTGC AGTATGGCAG CCACCACCAT
1741ATGGGGCCAC CAAACACTTG CAATGTGCTG CTTGGAATTG CCCAACTTTC TTGTACAAAG
1801Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)