Construct: ORF ccsbBroadEn_11910

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004844.1_s300c1, BRDN0000394950
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RBM15B (29890)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29890 RBM15B RNA binding motif protein 15B NM_013286.5 63.2% 63.1% 1_981del;1778G>A
2 mouse 109095 Rbm15b RNA binding motif protein 15B NM_175402.4 55.9% 60.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1758
ORF length:
1689
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCCCGAGGAT GACCAGCGGG CCACGCGCAA CCTCTTCATT GGTAACCTGG
121ACCACAGCGT ATCTGAGGTG GAGCTGCGAA GGGCCTTCGA GAAATATGGC ATCATCGAGG
181AGGTGGTCAT CAAGAGGCCT GCCCGTGGCC AGGGCGGTGC CTATGCCTTC CTCAAGTTCC
241AGAACCTGGA CATGGCCCAT AGGGCTAAGG TGGCCATGTC GGGCCGAGTG ATTGGTCGCA
301ACCCCATTAA GATAGGCTAT GGCAAGGCCA ACCCCACCAC TCGTCTCTGG GTGGGTGGCC
361TGGGACCTAA CACGTCACTG GCGGCTCTGG CCCGAGAGTT TGACCGCTTT GGGAGCATTC
421GGACCATTGA TCACGTCAAA GGAGATAGCT TTGCCTATAT TCAGTACGAG AGCTTGGACG
481CAGCCCAGGC CGCCTGTGCT AAAATGAGGG GTTTTCCCTT GGGTGGACCA GACCGCAGGC
541TCCGCGTGGA TTTTGCCAAA GCAGAGGAGA CTCGGTACCC CCAGCAGTAC CAGCCCTCGC
601CACTCCCTGT GCATTATGAG CTGCTCACAG ATGGATACAC CCGGCACCGC AACCTGGACG
661CCGACCTGGT GCGGGACAGG ACGCCCCCAC ACCTTCTGTA CTCAGACCGA GACCGGACTT
721TTTTGGAAGG GGACTGGACC AGCCCCAGTA AAAGCTCTGA CCGCCGAAAC AGCCTTGAGG
781GCTACAGTCG CTCAGTGCGC AGCCGGAGTG GTGAGCGTTG GGGGGCAGAT GGAGACCGTG
841GTTTGCCCAA GCCCTGGGAA GAGAAGCGGA AACGGAGAAG CCTTTCCAGT GACCGTGGGA
901GGACAACCCA TTCACCATAT GAGGAACGGA GTAGGACCAA GGGCAGTGGG CAGCAGTCAG
961AGCGGGGCTC CGACCGCACC CCTGAGCGCA GCCGCAAGGA GAACCACTCC AGTGAAGGGA
1021CCAAGGAGTC CAGCAGCAAC TCCCTCAGCA ACAGCAGACA TGGGGCTGAG GAACGGGGCC
1081ACCACCACCA CCACCACGAG GCTGCAGACT CTTCCCACGG GAAGAAGGCA AGAGACAGCG
1141AGCGCAATCA CCGGACCACA GAGGCCGAGC CCAAGCCTCT GGAAGAGCCA AAACACGAGA
1201CCAAAAAGCT GAAGAATCTT TCAGAGTACG CTCAGACACT ACAGCTGGGT TGGAATGGGC
1261TTCTGGTGTT GAAAAACAGC TGCTTCCCCA CGTCTATGCA TATCCTAGAG GGGGACCAGG
1321GGGTGATCAG CAGTCTCCTC AAAGACCACA CTTCTGGGAG CAAGCTGACC CAGCTGAAGA
1381TCGCCCAGCG CCTTCGACTG GACCAGCCCA AGCTTGACGA GGTCACACGA CGCATCAAGC
1441AGGGGAGCCC CAACGGCTAT GCGGTCCTCT TAGCCACCCA GGCAACCCCC AGTGGGCTTG
1501GCACTGAGGG GATGCCCACA GTAGAGCCCG GTCTGCAGAG GCGGCTTCTC AGGAACCTGG
1561TCTCCTACTT GAAACAGAAG CAGGCCGCAG GGGTGATCAG CTTGCCAGTG GGGGGGTCCA
1621AGGGCAGAGA CGGCACAGGC ATGCTCTACG CCTTCCCACC CTGCGACTTT TCCCAGCAGT
1681ACCTCCAGTC AGCACTAAGG ACATTGGGCA AGCTAGAAGA AGAACACATG GTGATAGTCA
1741TCGTCAGAGA CACTGCCTTG CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
1801gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)