Construct: ORF ccsbBroadEn_12061

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005761.1_s300c1, BRDN0000397151
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UGT1A10 (54575)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54575 UGT1A10 UDP glucuronosyltransferase... NM_019075.2 82.5% 81.6% (many diffs)
2 human 54576 UGT1A8 UDP glucuronosyltransferase... NM_019076.4 79.3% 76.2% (many diffs)
3 human 54577 UGT1A7 UDP glucuronosyltransferase... NM_019077.2 78.5% 75.4% (many diffs)
4 human 54600 UGT1A9 UDP glucuronosyltransferase... NM_021027.3 78.2% 74.9% (many diffs)
5 human 54578 UGT1A6 UDP glucuronosyltransferase... NM_205862.2 31.9% 30.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1389
ORF length:
1323
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TCGCGCAGGG TGGACCAGCC CCGTTCCTTT ATGTGTGTGT CTACTGCTGA
121CCTGTGGCTT TGCCGAGGCA GGGAAGCTGC TGGTAGTGCC CATGGATGGG AGTCACTGGT
181TCACCATGCA GTCGGTGGTG GAGAAACTTA TCCTCAGGGG GCATGAGGTG GTTGTAGTCA
241TGCCAGAGGT GAGTTGGCAA CTGGAAAGAT CACTGAATTG CACAGTGAAG ACTTACTCAA
301CCTCGTACAC TCTGGAAGAT CAGAACCGGG AATTCATGGT TTTCGCCCAT GCTCAATGGA
361AAGCACAGGC ACAAAGTATA TTTTCTCTAT TAATGAGTTC ATCCAGTGGT TTTCTTGACT
421TATTTTTTTC GCATTGCAGG AGTTTGTTTA ATGACCGAAA ATTAGTAGAA TACTTAAAGG
481AGAGTTCTTT TGATGCAGTG TTTCTGGATC CTTTTGATAC CTGTGGCTTA ATTGTTGCTA
541AATATTTCTC CCTCCCCTCT GTGGTCTTCA CCAGGGGAAT ATTTTGCCAC CATCTTGAAG
601AAGGTGCACA GTGCCCTGCT CCTCTTTCCT ATGTCCCCAA TGATCTCTTA GGGTTCTCAG
661ATGCCATGAC TTTCAAGGAG AGAGTATGGA ACCACATCGT GCACTTGGAG GACCATTTAT
721TTTGCCAGTA TCTTTTTAGA AATGCCCTAG AAATAGCTTC TGAAATTCTC CAAACCCCTG
781TCACGGCATA TGATCTCTAC AGTCACACAT CAATTTGGTT GTTGCGAACG GACTTTGTTT
841TGGACTATCC CAAACCCGTG ATGCCCAACA TGATCTTCAT TGGTGGTATC AACTGTCATC
901AGGGAAAGCC ATTGCCTATG GAATTTGAAG CCTACATTAA TGCTTCTGGA GAACATGGAA
961TTGTGGTTTT CTCTTTGGGA TCAATGGTCT CAGAAATTCC AGAGAAGAAA GCTATGGCAA
1021TTGCTGATGC TTTGGGCAAA ATCCCTCAGA CAGTCCTGTG GCGGTACACT GGAACCCGAC
1081CATCGAATCT TGCGAACAAC ACGATACTTG TTAAGTGGCT ACCCCAAAAC GATCTGCTTG
1141GTCACCCGAT GACCCGTGCC TTTATCACCC ATGCTGGTTC CCATGGTGTT TATGAAAGCA
1201TATGCAATGG CGTTCCCATG GTGATGATGC CCTTGTTTGG TGATCAGATG GACAATGCAA
1261AGCGCATGGA GACTAAGGGA GCTGGAGTGA CCCTGAATGT TCTGGAAATG ACTTCTGAAG
1321ATTTAGAAAA TGCTCTAAAA GCAGTCATCA ATGACAAAAG AAAGAAGCAG CAGTCAGGAA
1381GACAGATGTG CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
1441tttgttgcaa cgaac

Download FASTA (ORF) (Full)