Construct: ORF ccsbBroadEn_12130

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008532.1_s300c1, BRDN0000385631
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACSM5 (54988)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54988 ACSM5 acyl-CoA synthetase medium ... NM_001324373.2 100% 100%
2 human 54988 ACSM5 acyl-CoA synthetase medium ... NM_001324371.2 35.9% 35.9% 625_1737del
3 human 54988 ACSM5 acyl-CoA synthetase medium ... NM_017888.3 35.9% 35.9% 625_1737del
4 human 54988 ACSM5 acyl-CoA synthetase medium ... NM_001324372.2 35.7% 35.7% 625_1746del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
690
ORF length:
624
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG ACCATGGCTG AGACACCTAG TCCTCCAGGC ACTGAGGAAC TCCAGGGCAT
121TCTGTGGGTC TCATGGGAAG CCAGCACCTC TACCTGTTCC TCAGAAGATC GTGGCCACCT
181GGGAAGCCAT CAGCCTGGGA AGGCAGCTGG TGCCTGAGTA CTTCAACTTC GCCCATGATG
241TGCTGGATGT GTGGAGTCGG CTGGAAGAGG CTGGACACCG CCCCCCAAAT CCTGCCTTCT
301GGTGGGTCAA TGGCACAGGA GCAGAGATCA AGTGGAGCTT TGAGGAGCTG GGGAAGCAGT
361CCAGGAAGGC AGCCAATGTG CTGGGGGGTG CATGCGGCCT GCAGCCTGGG GACAGAATGA
421TGCTGGTACT CCCACGGCTC CCGGAGTGGT GGCTGGTCAG TGTGGCTTGC ATGCGGACAG
481GGACTGTGAT GATTCCGGGT GTGACTCAGC TGACAGAGAA GGACCTCAAG TACCGGCTGC
541AGGCGTCCAG GGCCAAGTCC ATTATCACCA GTGACTCCCT AGCTCCAAGG GTGGATGCCA
601TCAGTGCCGA ATGCCCCTCC CTCCAGACCA AGCTGCTGGT GTCAGACAGC AGTCGGCCAG
661GCTGGTTGAA CTTCAGGGAA CTCCTCCGGT GCCCAACTTT CTTGTACAAA GTtggcatta
721taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)