Construct: ORF ccsbBroadEn_12440

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007617.1_s300c1, BRDN0000391801
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RBM26 (64062)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64062 RBM26 RNA binding motif protein 26 XM_011535195.1 8.2% 2.1% 1_1783del;1967_2211del
2 human 64062 RBM26 RNA binding motif protein 26 NM_022118.5 6.2% 1.6% 1_2521del;2705_2940del
3 human 64062 RBM26 RNA binding motif protein 26 XM_011535193.3 6.2% 1.6% 1_2521del;2705_2940del
4 human 64062 RBM26 RNA binding motif protein 26 NM_001286632.1 6.2% 1.5% 1_2530del;2714_2949del
5 human 64062 RBM26 RNA binding motif protein 26 XM_011535192.3 6.2% 1.5% 1_2530del;2714_2949del
6 human 64062 RBM26 RNA binding motif protein 26 XM_017020700.2 6.2% 1.5% 1_2521del;2705_2949del
7 human 64062 RBM26 RNA binding motif protein 26 XM_017020698.2 6.1% 1.5% 1_2530del;2714_2958del
8 human 64062 RBM26 RNA binding motif protein 26 XM_017020699.2 6.1% 1.5% 1_2545del;2729_2964del
9 human 64062 RBM26 RNA binding motif protein 26 XM_017020694.2 6.1% 1.5% 1_2560del;2744_2979del
10 human 64062 RBM26 RNA binding motif protein 26 XM_017020695.2 6.1% 1.5% 1_2551del;2735_2979del
11 human 64062 RBM26 RNA binding motif protein 26 XM_017020697.2 6.1% 1.5% 1_2632del;2816_2982del
12 human 64062 RBM26 RNA binding motif protein 26 XM_011535191.3 6.1% 1.5% 1_2566del;2750_2985del
13 human 64062 RBM26 RNA binding motif protein 26 XM_017020696.2 6.1% 1.5% 1_2560del;2744_2988del
14 human 64062 RBM26 RNA binding motif protein 26 XM_011535190.2 6.1% 1.5% 1_2566del;2750_2994del
15 human 64062 RBM26 RNA binding motif protein 26 XM_017020693.2 6.1% 1.5% 1_2575del;2759_2994del
16 human 64062 RBM26 RNA binding motif protein 26 XM_006719857.2 6.1% 1.5% 1_2647del;2831_2997del
17 human 64062 RBM26 RNA binding motif protein 26 XM_005266497.2 6.1% 1.5% 1_2647del;2831_3000del
18 human 64062 RBM26 RNA binding motif protein 26 XM_011535189.2 6% 1.5% 1_2575del;2759_3003del
19 human 64062 RBM26 RNA binding motif protein 26 XM_017020692.2 6% 1.5% 1_2593del;2777_3012del
20 human 64062 RBM26 RNA binding motif protein 26 NM_001366735.2 6% 1.5% 1_2602del;2786_3021del
21 human 64062 RBM26 RNA binding motif protein 26 XM_011535188.3 6% 1.5% 1_2602del;2786_3021del
22 human 64062 RBM26 RNA binding motif protein 26 NM_001286631.1 6% 1.5% 1_2608del;2792_3027del
23 human 64062 RBM26 RNA binding motif protein 26 XM_011535187.3 6% 1.5% 1_2608del;2792_3027del
24 human 64062 RBM26 RNA binding motif protein 26 XM_011535186.3 6% 1.5% 1_2602del;2786_3030del
25 human 64062 RBM26 RNA binding motif protein 26 XM_011535185.3 6% 1.5% 1_2617del;2801_3036del
26 human 64062 RBM26 RNA binding motif protein 26 XM_017020691.2 6% 1.5% 1_2623del;2807_3042del
27 human 64062 RBM26 RNA binding motif protein 26 XM_011535184.2 6% 1.5% 1_2617del;2801_3045del
28 human 64062 RBM26 RNA binding motif protein 26 XM_017020689.2 5.9% 1.5% 1_2623del;2807_3051del
29 human 64062 RBM26 RNA binding motif protein 26 XM_017020690.2 5.9% 1.5% 1_2632del;2816_3051del
30 human 64062 RBM26 RNA binding motif protein 26 XM_011535183.3 5.9% 1.5% 1_2638del;2822_3057del
31 human 64062 RBM26 RNA binding motif protein 26 XM_011535182.2 5.9% 1.5% 1_2632del;2816_3060del
32 human 64062 RBM26 RNA binding motif protein 26 XM_005266491.5 5.9% 1.5% 1_2647del;2831_3066del
33 human 64062 RBM26 RNA binding motif protein 26 XM_011535180.3 5.9% 1.5% 1_2647del;2831_3066del
34 human 64062 RBM26 RNA binding motif protein 26 XM_011535181.2 5.9% 1.5% 1_2638del;2822_3066del
35 human 64062 RBM26 RNA binding motif protein 26 XM_017020688.2 5.9% 1.5% 1_2647del;2831_3066del
36 human 64062 RBM26 RNA binding motif protein 26 XM_024449393.1 5.9% 1.5% 1_2647del;2831_3066del
37 human 64062 RBM26 RNA binding motif protein 26 XM_011535179.2 5.9% 1.5% 1_2647del;2831_3075del
38 human 64062 RBM26 RNA binding motif protein 26 XM_017020703.2 5.4% 1.5% (many diffs)
39 human 64062 RBM26 RNA binding motif protein 26 XM_017020701.2 5.3% 1.5% (many diffs)
40 human 64062 RBM26 RNA binding motif protein 26 XM_017020702.2 5.3% 1.5% (many diffs)
41 mouse 74213 Rbm26 RNA binding motif protein 26 NM_134077.4 5.4% 1.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
249
ORF length:
183
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGAGGCAGGG GGCGAGGGCG AGGGCGAGGT GTGCCTGGTC ATGCTGTGGT
121GGATCACCGT CCCAGGGCAT TGGAGATTTC TGCATTTACG GAGAGCGATA GAGAAGATCT
181TCTTCCTCAT TTTGCGCAAT ATGGTGAAAT TGAAGATTGT CAGATTGATG ATTCCTCACT
241TCATGCAGTA CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
301tttgttgcaa cgaac

Download FASTA (ORF) (Full)